Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1593 |
Symbol | pyrH |
ID | 1045133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1787211 |
End bp | 1787954 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637144993 |
Product | uridylate kinase |
Protein accession | NP_743750 |
Protein GI | 26988325 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0528] Uridylate kinase |
TIGRFAM ID | [TIGR02075] uridylate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.556866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.62461 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCAGC AGGTGAGTGG TCGCCAACCT CGCTATAAAC GCATTTTGCT CAAACTTAGC GGCGAGGCCC TGATGGGCTC GGAAGACTTC GGGATCGACC CGAAAGTGCT GGATCGCATG GCGCTTGAAG TTGGCCAGCT GGTAGGGATC GGTGTCCAGG TCGGCCTGGT GATCGGTGGT GGCAACCTGT TCCGCGGCGC CGCGCTCAGC GCAGCCGGCA TGGACCGCGT CACGGGTGAC CACATGGGGA TGCTGGCTAC CGTGATGAAC GGCCTGGCCA TGCGCGATGC GCTGGAGCGC TCGAACATCC CGGCCCTGGT CATGTCGGCC ATTTCCATGG TGGGTGTCAC CGATCATTAC GATCGCCGCA AAGCTATTCG TCACCTCAAC TCCGGGGATG TGGTAATTTT CTCCGCCGGT ACCGGCAACC CGTTCTTCAC CACCGACTCC GCGGCCTGCC TGCGCGCCAT CGAAATCGAT GCTGACGTGG TGCTGAAGGC GACCAAGGTC GATGGCGTGT ACACTGCCGA TCCATTCAAG GACCCGCATG CCGAGAAATT CGATCACCTG ACCTACGATG AGGTTCTGGA TCGCAAGCTG GGTGTGATGG ATCTGACCGC AATCTGCCTG TGCCGTGACC ACAAGATGCC ATTGCGGGTA TTCAACATGA ACAAGCCTGG CGCCCTGCTG AACATTGTGG TGGGTGGCGC TGAAGGCACA CTGATCGAGG AAGGCCAAGC ATGA
|
Protein sequence | MAQQVSGRQP RYKRILLKLS GEALMGSEDF GIDPKVLDRM ALEVGQLVGI GVQVGLVIGG GNLFRGAALS AAGMDRVTGD HMGMLATVMN GLAMRDALER SNIPALVMSA ISMVGVTDHY DRRKAIRHLN SGDVVIFSAG TGNPFFTTDS AACLRAIEID ADVVLKATKV DGVYTADPFK DPHAEKFDHL TYDEVLDRKL GVMDLTAICL CRDHKMPLRV FNMNKPGALL NIVVGGAEGT LIEEGQA
|
| |