Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1581 |
Symbol | |
ID | 1045193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1772814 |
End bp | 1774805 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637144981 |
Product | BNR domain-containing protein |
Protein accession | NP_743738 |
Protein GI | 26988313 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.151429 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTACA ACACGAATAA CCCCGCCCCG AGCAGCGACC CGAGAGACTT CAACGATAAC TCTCTAGCGC TTGATGAGGG CATGGCCAGT CTGGAAGACA CTTTTGTCGA TCGTTTCGGT CGCCCACGGT ACACCTACCA GGCATTTCAT AACTTGGTCA TCGACTCGAA AGAGCAAGTC GCTCCAACAG TCGATGCCGC CAAGGAGGCC GTTAACTCAA AGGCAGATGC AGCCATCGAG GAGATGCAGG AAACCGCTGC CAGCCTTGGC GACGACCTTA ATAACAAGCG GTATGACACG TACGCCGAGA TGCTGGCGGA CCCACAAACC CGCGATGCGG TCATGGCGGT GGTAGACGGA GACGAAGACC CGAACCTGAA CGGTTGGTAT TCGTGGAGTG CTAGCTCTGG CGCTTGGCGT CGGTTCGCCG GCCAGCCTGC CATCAAATCT CTGGTGGATG ATCAATTCTA TCGTGAGGCC GACAAGCTTT CAGGAGATGG TGACTTGGTA ATGGATGCGC AGAGCGGGCA GATGTTGGTT TCACTTCCGT TGAAACGGGC CGATGCTGCA GTCTTCATCG CGGGTGACAG AGAGCCGTTC CGGGTTGATA CCGAGCAGGA CCACCTGGTG GTGAATTCGG CCCTGCGTCG GTCGGTAGAC ATCATGGACG GTAGCGAAGG CCACAGCGAT CGCCGCGAAT ATCCAGAGAT CTACACGCTT CCAGTCAGCG ACAGCGCGCT AGTGTTTGGC CTGCAGGATG GCTCGATTGC CCTGCATATC GACACGAAGA ACCGGAAGGT TAAAACCGAC TTCTCTATCG ATTGGAACAT GGAGCAGCGC CCGCCAAGCG TTTACGTAGA CGCGCCTCCA CGCCTTGAAC GGAACATCAA CGACCCTGAC TATCGGCTGT CGGGGAGGCT GTATCAGGCG ACAGCAACCA TTGAGCGCAC CGGCAGCGAG CGCTACTGGC TGGCATGGCG GGCCGACAAC CAATTGGCAG GAGAGGGGCC TGGCAACTTC GCGGTTCTTG CTTACTCCGA TGATGGCGGT CAGACCGTCG AAGAGTACGG CTATTTTACC TTTACCGCAG CAGATGACCC GCTGAACCCC TTGCCGATCG CTCAGCGCGC CGGCCGAGAC AAGCACATCG TTGACCCTAT GTTGTGGAAA GACCCGGATG GTCGCCTGTG GCTGTTCTTC GGGGTCTTCG GAAACAACAA ACTCATGGAT GGCGTGGGTG GGTGCTGGGC CGTTATCTGT CACAACCCTA ACGCGGAATT CCCAGTATGG GGTGTTCCCT TCCGTTTATC GTATTTCGGC GACCCTCGCC ATCCGGTACA GGTCAATGGT GATTGGTATC TGGCAGTAGA TGGCTGGAGA TCCAATGCAC TGTACCCGCC TCGAGAGATG GACTATGTGG GGCCGCATAT CTACAAGTTC GACTGGCGAA ACAAGAAGCT CGAGCATATT TCCCAGCTTC CGCCCAACAA CGGAAGTCAG CACAGCGGTT TCTTCGAAAC TGAATTTGTG CAGCGGGCCG ATGGTTCTGT TTTGGCGACG TGCCGCTGGA ACCCAGGAGA TTCTGGGGTA CTGATGTCGG TCAGTACCGA CATGATGAAG ACCTGGACGC CTTGGGTGAA CTACCTGGCG TTGGCTCCTT CTTCGTCCTC GCGGATCTGG CTTGGCCGTT CTCCGAGCGG TCGACTGTTG ATCTGCTGGA ACAACGATAT CGAGAGGAAA ACCCTCACGC TTGCTCTATC GGATGATGAG GGGGTCACCT GGCCTCACAA AGTGGTGCTG GAGCCCAACT CCGTTGGGCA AGTCACGTAC CCGATTGTGA CCTTCGGGGA CGATGGGTTG ATCCTCATCG CGTATGACAA CGAACGGACC GCGAAGCGGC AGATTCGCAC TGCCAGGGTC ATTGAGCAGG AGGTCGTGGC CGGCACCAGT GTGTCGGTGA TCAAAACCGT CAGCGACCCT TTTAATCCAT AA
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Protein sequence | MRYNTNNPAP SSDPRDFNDN SLALDEGMAS LEDTFVDRFG RPRYTYQAFH NLVIDSKEQV APTVDAAKEA VNSKADAAIE EMQETAASLG DDLNNKRYDT YAEMLADPQT RDAVMAVVDG DEDPNLNGWY SWSASSGAWR RFAGQPAIKS LVDDQFYREA DKLSGDGDLV MDAQSGQMLV SLPLKRADAA VFIAGDREPF RVDTEQDHLV VNSALRRSVD IMDGSEGHSD RREYPEIYTL PVSDSALVFG LQDGSIALHI DTKNRKVKTD FSIDWNMEQR PPSVYVDAPP RLERNINDPD YRLSGRLYQA TATIERTGSE RYWLAWRADN QLAGEGPGNF AVLAYSDDGG QTVEEYGYFT FTAADDPLNP LPIAQRAGRD KHIVDPMLWK DPDGRLWLFF GVFGNNKLMD GVGGCWAVIC HNPNAEFPVW GVPFRLSYFG DPRHPVQVNG DWYLAVDGWR SNALYPPREM DYVGPHIYKF DWRNKKLEHI SQLPPNNGSQ HSGFFETEFV QRADGSVLAT CRWNPGDSGV LMSVSTDMMK TWTPWVNYLA LAPSSSSRIW LGRSPSGRLL ICWNNDIERK TLTLALSDDE GVTWPHKVVL EPNSVGQVTY PIVTFGDDGL ILIAYDNERT AKRQIRTARV IEQEVVAGTS VSVIKTVSDP FNP
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