| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1571 |
|---|
| Symbol | |
|---|
| ID | 1045335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1763173 |
|---|
| End bp | 1763658 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637144971 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_743728 |
|---|
| Protein GI | 26988303 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01725] phage protein, HK97 gp10 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.88517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0039923 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACG GCGTCGAGTT CAGCATTCTC GGCCTGGACA GCCTGCTGGG TAAGCTGGGC
GAGGTCAGCA TGGACGTTCG CCGCAAAGGT GGCCGGGCCG CACTGCGCAA GGCCGCCCAG
GTGGTGGTGC AAAAGGCAAA GGCAGGTGCT GAGCGAATTG ACGACAAGGC CACTGGCCGC
TCGATCTCGG ACAGCATCGC GTTGCGCTGG AACGGGCGAT TGTTCAAGCG CACCGGCGAT
CTGGGCTTTC GCATCGGCGT GCTGCACGGC GCCGTGCTCA AGGATGGCGG CGACCTCAGC
ACCAACGCTC CGACGCCTCA CTGGCGCCTA ATCGAGTTCG GCACCGAGAA GATGCCGGCC
GCGCCGTTTA TGCGCCCAGC CCTGGCCGAC AGCATCAGCG AGGTGACCAA TACCTTCGTC
ACCGAGTACG AGAAGGCAAT CGACCGCGCC ATCCGGCGAG CAGCGAAAAA GGCAGCACGC
TCATGA
|
|---|
| Protein sequence | MADGVEFSIL GLDSLLGKLG EVSMDVRRKG GRAALRKAAQ VVVQKAKAGA ERIDDKATGR
SISDSIALRW NGRLFKRTGD LGFRIGVLHG AVLKDGGDLS TNAPTPHWRL IEFGTEKMPA
APFMRPALAD SISEVTNTFV TEYEKAIDRA IRRAAKKAAR S
|
|---|
| |