Gene PP_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1570 
Symbol 
ID1045347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1762839 
End bp1763180 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content63% 
IMG OID637144970 
Producthead-tail adaptor 
Protein accessionNP_743727 
Protein GI26988302 
COG category[R] General function prediction only 
COG ID[COG5614] Bacteriophage head-tail adaptor 
TIGRFAM ID[TIGR01563] phage head-tail adaptor, putative, SPP1 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00396333 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGCCG GCAGGCTGCG GCACCGCATC GACATCCAGG AGTTGAGGCC GGTGCGTGAC 
CCGGTGACAC TGGAGTTCGG TGAGCCTGAA TGGGTCACTC GCTGGGAGAA ATGCCCAGCC
AGTGTCGAAG ACCTGTCGGC CAGGGACTTC ATCGCGGCTC AGGCCGGCCA GGCCCAGGCC
ACCGGCCGGA TGGTTATCCG GTACCGAACT GGCGTACTTC CAACCATGCG CATCCTTTAC
CGGGGTGAGG TGTACAGCAT CGTCGGCCCT CCACTGGCTG ATGCCAAGTC CGGCCTGGAT
TACCTGACGA TATTGGTCGA GAAGGGGGTG AAGGATGGCT GA
 
Protein sequence
MQAGRLRHRI DIQELRPVRD PVTLEFGEPE WVTRWEKCPA SVEDLSARDF IAAQAGQAQA 
TGRMVIRYRT GVLPTMRILY RGEVYSIVGP PLADAKSGLD YLTILVEKGV KDG