Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1570 |
Symbol | |
ID | 1045347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1762839 |
End bp | 1763180 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144970 |
Product | head-tail adaptor |
Protein accession | NP_743727 |
Protein GI | 26988302 |
COG category | [R] General function prediction only |
COG ID | [COG5614] Bacteriophage head-tail adaptor |
TIGRFAM ID | [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00396333 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGGCCG GCAGGCTGCG GCACCGCATC GACATCCAGG AGTTGAGGCC GGTGCGTGAC CCGGTGACAC TGGAGTTCGG TGAGCCTGAA TGGGTCACTC GCTGGGAGAA ATGCCCAGCC AGTGTCGAAG ACCTGTCGGC CAGGGACTTC ATCGCGGCTC AGGCCGGCCA GGCCCAGGCC ACCGGCCGGA TGGTTATCCG GTACCGAACT GGCGTACTTC CAACCATGCG CATCCTTTAC CGGGGTGAGG TGTACAGCAT CGTCGGCCCT CCACTGGCTG ATGCCAAGTC CGGCCTGGAT TACCTGACGA TATTGGTCGA GAAGGGGGTG AAGGATGGCT GA
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Protein sequence | MQAGRLRHRI DIQELRPVRD PVTLEFGEPE WVTRWEKCPA SVEDLSARDF IAAQAGQAQA TGRMVIRYRT GVLPTMRILY RGEVYSIVGP PLADAKSGLD YLTILVEKGV KDG
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