| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1563 |
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| Symbol | |
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| ID | 1045361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1756941 |
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| End bp | 1758626 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144963 |
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| Product | phage terminase, large subunit, putative |
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| Protein accession | NP_743720 |
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| Protein GI | 26988295 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.446284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000374969 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGCGG CTGAAAAGTA CGCCAAGGAT GTCGTCGCGG GAAAGATCCT CGTTTGCAAG
TGGATCATGC TGCTGGCTCA GCGTCACCTC GATGACCTGG CTGTGTCCAA GCGAAAGGAC
TTTCCGTACA AATTTGACCC CGCCAAGGCG GAGAAAGTCG CCAAGTTCCT GCAGCTGCTG
CCGCATACCA AGGGCAAATG GGGCGGCAAG AAGCAGCTGA TCAAGCTGGA GCCTTGGCAG
CTTTTCTCGG TGTGCGTACC GTTCGGCTGG GTCCGTAAGA AAGATGGCAC ACGGCGTTAC
CGCACGATCC TGGTGTTCGT GCCCAGGAAG AACGGCAAGT CCATCATCGG TGGCGGCGTC
GGCCTCTACA TGTTCGTTGC AGACGGAGAG TTCGGCGCCG AGGTTTACTC GGGGGCGACC
ACTGAGAAAC AGGCCTGGGA GGTGTTCAGG CCGGCCAAGC TGATGGTCGA GCGTACCGAC
GACTTGCGGG AGCACTATGG CGTCGACGTG AACGCATCCA ACATGGTCGT TCTGGCCGAT
GGATCGCGCT TCGAGCCTGT CATCGGCAAG CCCGGGGACG GGTCATCGCC GTCGTGTTCG
GTGGTGGACG AATATCACGA ACACCAAGAC TCCACGCTGT ACGACACGAT GGAGACCGGG
ATGGGGGCCC GCGAGCAACC CATCATGCTG GTGATCACCA CGGCGGGCTC AAGTATTGGC
GGCCCCTGCC ACCAGTTGAT CCGCGATTCC GAGCGAATGC TGGAGGGTGT GATCGACCGG
CCGGACCTAT GGCCGGCCCT CTACACTATC GACCAGGGCG ACGATTGGAC CAGCGAAATC
GCACTGCGCA AGGCGAATCC AAACTTTGGG ATATCCGTCG CCGAGGACTT CCTGCTTGCC
CGGCAGCGTG ATGCGATGCA GTCGGCGACC AAGCAGGCCA CCTTCCGTAC CAAGCACCTG
AACGAGTGGG TCGGCGCCAA GAATGCCTGG CTCAACATGC TGCGTTGGAA AGAGGCGCCG
GTCAGGAAGA GCCTTGCGGA GCTGGAGGGG CGGTCGTGCT ACGGCAGTCT CGACCTGGCT
AGCAAGATCG ACATCGCCGC CAACCTGCTG ATCTTCCCGC CGCATGGCGA CGATCCGTTC
TGGCACATCC ACGCCAGGTA CTACCTGCCA GAAGCGCGTG TGCTTGAGGA GCTGGACAGC
AACACCGCGC GGTACCGCGA GTTCGATGCA CTAGGCCTGC TGACCCTGAC TGATGGAGAA
GTCACCGACT TCGAAGTCAT CAAAGAGGAC ATGCGTGAGT TTGCCGGGCG CTTCGACATC
CGGGCCTACG CCTACGACCC GTGGCAGGCC ACGCAGTTGG CCCAGGAAAT GGACGCCGAG
GGACTGCCGA TGGTTGAGCT GCGCCAGACG GTGCAGAACC TGAGCGAGCC CATGAAAGAG
GTAGAAGCCC TGGTGCTGCA GCGAAAGCTG GCCCACGGCG ATTGCCCGGT ACTGACCTGG
ATGGCCTCGA ATGTCGTGGC GAAGCTGGAC GTGAAGGACA ACATCTACCC CAACAAGGAG
CGCCCGGAGA ACAAGATCGA CGGCATGGTG AGCTTGATCA CCGGCTGCGC CGTGGCCATC
AAGCTCGGTA TCGACGACTC CGGCCACTTC GATGACTTTC TTGCCAGCCC GATCGTGGTT
GGCTAA
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| Protein sequence | MKAAEKYAKD VVAGKILVCK WIMLLAQRHL DDLAVSKRKD FPYKFDPAKA EKVAKFLQLL
PHTKGKWGGK KQLIKLEPWQ LFSVCVPFGW VRKKDGTRRY RTILVFVPRK NGKSIIGGGV
GLYMFVADGE FGAEVYSGAT TEKQAWEVFR PAKLMVERTD DLREHYGVDV NASNMVVLAD
GSRFEPVIGK PGDGSSPSCS VVDEYHEHQD STLYDTMETG MGAREQPIML VITTAGSSIG
GPCHQLIRDS ERMLEGVIDR PDLWPALYTI DQGDDWTSEI ALRKANPNFG ISVAEDFLLA
RQRDAMQSAT KQATFRTKHL NEWVGAKNAW LNMLRWKEAP VRKSLAELEG RSCYGSLDLA
SKIDIAANLL IFPPHGDDPF WHIHARYYLP EARVLEELDS NTARYREFDA LGLLTLTDGE
VTDFEVIKED MREFAGRFDI RAYAYDPWQA TQLAQEMDAE GLPMVELRQT VQNLSEPMKE
VEALVLQRKL AHGDCPVLTW MASNVVAKLD VKDNIYPNKE RPENKIDGMV SLITGCAVAI
KLGIDDSGHF DDFLASPIVV G
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