Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1555 |
Symbol | |
ID | 1045449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1753027 |
End bp | 1754298 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144955 |
Product | phage integrase, putative |
Protein accession | NP_743712 |
Protein GI | 26988287 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.206278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000047649 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAAAATCA GCGATGCAGA GATTCGCCGG CAGGCCGCCG GCCAAGTGCG TGACCTTCGC GCCCTGGGCA ACCACGGCCT GTATTTCCGC TTTCATCGCT CCCGCGAGCG CGGGTCGTGG TACCTGATCC ACAAGGGCAA GTGGAACCTG ATCGGCTCAT ACCCTGAGCT GAGCGCTGCC AAGGTGGCCG CTGCGCTGCC GGATATCCGC CTGCGCCTGG AAGCCGGCGA GGGATCGAGC CTGTCGAGCT GGGTGCTGAC TGGCGAGTTG CTGGACTGGT TCGCTGAGCG CATGTCCCGT GACCGCAGCC TCTCGGCCAA GCGCAAACGC ACGGCGGCGT CGGCGATCAA GCAGCATCTG GCGCCGCGCC TGGGAGAAAC GCCATTGGCC CAGATCGACA AAGCGCTGCT CGACCGCGAG CTGATGTGGC CGCTGCAAGA GTCGCTGTCG ATCGACTATG TGCGCCTGGT CTTTCAATTG CTCGCGTTGG CCTTCCGGCA GGCCGCCAAA CTCGGCCTGA TCAGCACCAA CCCTATGGCC GGCATCCGCT TCCGTGATTT CTCCAAGGCC AAGGTCACGG TCAAGCCGTC GAGGCTGCGT GGCGTGCACC TCGAAGACCT GATGGCGCGC ATGAAAAGCA CCCTGGCCCA CAACCCGCAG CATGGCCTGC TGGCCCTGAT GATGCTGTGC CACGGCACCC GGCTGGGCGA AACCCGCATG GCCCGCTGGA GCCACATCAG CCTGGCCGAA CGGGAGTGGT TCATTCCCGC CGAGCACACC AAGACCGGCG TGCAGCACCG CCTGCCACTG ACCGACCAGG TGCGCTTCCT GCTGATGGCC TGCCGCGAGA TCCAGCTCAA GCAGGGTTAC GAGGGCGAGT TCCTGTTCCC GGGGCGGCAG GGCAAGCCCA TGAGCGAATC GAAGGCCTCT GCGGTGTTCT CGGTCATGGG GCAGGGCGAG TGGACCAGCC ACGACCTACG CAAGCTGGCC CGTACCGGTT GGGCTGACCT CGGTGTTGAC CACCTAGTGG GTGAGCTGCT GATCAACCAC GCCATGGGTC ACAACGTGAA GGTGTACATC CAGTCCGACG TCATGGCCCG CAAGCGCGAG GCGCTGGAGA AGTGGCACGC ACACCTTGAT CAGAAGGGTT TCGCCTCGGT TCACGGCTTG ACCGGTGATA GATCAACGGA TTCATGGATT CTCTGCGAGG TCGCAGGGCG CGCGGGTTTC GACGGCCTTC CGGTATCCAC CATAAGCGAG GATTCGAAAT GA
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Protein sequence | MKISDAEIRR QAAGQVRDLR ALGNHGLYFR FHRSRERGSW YLIHKGKWNL IGSYPELSAA KVAAALPDIR LRLEAGEGSS LSSWVLTGEL LDWFAERMSR DRSLSAKRKR TAASAIKQHL APRLGETPLA QIDKALLDRE LMWPLQESLS IDYVRLVFQL LALAFRQAAK LGLISTNPMA GIRFRDFSKA KVTVKPSRLR GVHLEDLMAR MKSTLAHNPQ HGLLALMMLC HGTRLGETRM ARWSHISLAE REWFIPAEHT KTGVQHRLPL TDQVRFLLMA CREIQLKQGY EGEFLFPGRQ GKPMSESKAS AVFSVMGQGE WTSHDLRKLA RTGWADLGVD HLVGELLINH AMGHNVKVYI QSDVMARKRE ALEKWHAHLD QKGFASVHGL TGDRSTDSWI LCEVAGRAGF DGLPVSTISE DSK
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