Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1532 |
Symbol | |
ID | 1045479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1738082 |
End bp | 1739188 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637144932 |
Product | phage integrase, putative |
Protein accession | NP_743689 |
Protein GI | 26988264 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.697393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0751805 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCCA GGCCGCGTAA TCCTGGATCA AAGGACCTAC CGCCCAACCT TTACAGAAAG ACCGACAAGC GTAACGGGGT CACCTACTAC ACGTACCGCG ACCCCGTGAG CGATCGGATG TTTGGCCTGG GCAGCGACAA GGCAAAAGCG ATCGCTGAGG CGGTCTCCGC CAACATGGCC CTGCAGGTCG CGCCGCCCAC CCTGTCAGCG CGCATAGCGC CCGAACCGAG CGCGCCTGAT CGGAAATTCA GCGAGTGGAT CGTCGAGTAC TTTGCAGACC TGAAGGACCG TGAGCTTTCA GAATCGAGCA TGCGCAACCT TCGTATGCGA CTGAACCGGG TCGAGAAAGC ATTCGGAGAG CGCGGTATCC GCACGCTGAC GACCATGGAC ATCGCGGATT ACCTATCGAC CTACGTCAAA GAGGGTAAGG CCCAGATGGC CAGGGCTATG CGCTCCTTAC TGCGCGACCT TTTCATGGGG GCCATGGCCA GGGGCTGGGT CGACTACAAC CCAGTCGAAG CTACCAAAGC CGCACGGGTT AAGATCAAGC GCCAGCGCCT GACGCTAGAG TTGTGGAAAG CGATCTATGA GGAGGCTGCC CAGCCATGGC TCAAGCGCGC CATGGAGCTC GCTCTTATAA CCGGGCAGCG CCGCGAGGAC ATTGCTTCAT TCGTTTTCCG GGATGAGGTG GACGGATTCC TGCAGGTCGT CCAATCGAAG ACGGGGGCCA GGCTAAGGAT CAGCACCAGC GTAACGCTGG AATGCATCAG CCTGAGCTTG GGTGAAGTGA TACGGCGTTG CCGCGATCGG GTGCTGTCAA AGCACCTGGT GCACCACCAC CGGACAATCA GCCGCGCGAA GGCGGGATCT CCCATCATGC TCGACACAAT CAGCAAAGAG TTCGCCGCGG CCCGTGACCG GGCTGCAGTG AAACTTGGCC TCGACCTGGG GGCCAGCCCT CCAACCTTCC ATGAGCAGCG GTCCCTGGCG GCCAGGCTAC ATGACGAAGA AGGTCGAGAT GCACAGCGAC TGCTGGGTCA CCGTTCGGCC AAGATGACCG ATCTATACCG TGACAGCCGT GGCGCTGAGT GGATCGATGT CGCATAA
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Protein sequence | MAPRPRNPGS KDLPPNLYRK TDKRNGVTYY TYRDPVSDRM FGLGSDKAKA IAEAVSANMA LQVAPPTLSA RIAPEPSAPD RKFSEWIVEY FADLKDRELS ESSMRNLRMR LNRVEKAFGE RGIRTLTTMD IADYLSTYVK EGKAQMARAM RSLLRDLFMG AMARGWVDYN PVEATKAARV KIKRQRLTLE LWKAIYEEAA QPWLKRAMEL ALITGQRRED IASFVFRDEV DGFLQVVQSK TGARLRISTS VTLECISLSL GEVIRRCRDR VLSKHLVHHH RTISRAKAGS PIMLDTISKE FAAARDRAAV KLGLDLGASP PTFHEQRSLA ARLHDEEGRD AQRLLGHRSA KMTDLYRDSR GAEWIDVA
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