Gene PP_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1527 
Symbol 
ID1045486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1733979 
End bp1734794 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content64% 
IMG OID637144927 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionNP_743684 
Protein GI26988259 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0678963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.117289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGA GCACAGAAGA TCCACGCTTT GCCGGCGTTG CCCGGCTGTA TGGCGACCAG 
GGGCTGCAAC GTCTGGGCCA GGCCCATGTG GCTGTGGTCG GTATTGGCGG GGTGGGCTCG
TGGGTGGCCG AAGCCCTGGC ACGCAGCGGC GTGGGCGAGA TTACCCTGTT CGACCTGGAC
GATGTCTGCG TCAGTAACAC CAACCGCCAG GCCCATGCGC TGGAAGGGCA GGTGGGGCGG
CCCAAGGTCG AGGTCATGGC CGAGCGCCTG CGAGCGATCA ACCCGGCGTG CACGGTGCAT
GCGGTGGCCG ACTTCGTCAC CCGCGAGACC ATGGCCGAGT ACATCACCGA GCACCTCGAC
TGCGTGATCG ACTGCATCGA CAGCGTCATG GCCAAGGCGG CGTTGATCGC CTGGTGTCGG
CGGCGCAAGA TTGCCATTGT CACTACCGGT GGCGCGGGCG GGCAGATCGA CCCGACGCAG
ATCCAGATCG CCGACCTGAA CAAGACCTTC AACGACCCGT TGGCTTCACG GGTGCGTTCC
ACCCTGCGCC GCGACTACAA CTTCTCGCGG AATGTCAGCC GCAACTATGG CGTGCCGTGC
GTGTTCTCCA GTGAACAGCT GCGTTACCCC AAGGGGGATG GCAGCGTCTG CCTGCAGAAA
AGCTTCGTGG GTGAGGGCGT GCGGCTGGAC TGCTCGGGTG GCTTTGGTGC GGTGATGATG
GTGACCGCGA CCTTTGGCAT GGTAGCGGCG AGCAAGGCGA TAGAAAAACT GGTGGCTGGA
GCGCGCCGGC CGTCGGAACG GGTCAAGCCT GAATAA
 
Protein sequence
MNMSTEDPRF AGVARLYGDQ GLQRLGQAHV AVVGIGGVGS WVAEALARSG VGEITLFDLD 
DVCVSNTNRQ AHALEGQVGR PKVEVMAERL RAINPACTVH AVADFVTRET MAEYITEHLD
CVIDCIDSVM AKAALIAWCR RRKIAIVTTG GAGGQIDPTQ IQIADLNKTF NDPLASRVRS
TLRRDYNFSR NVSRNYGVPC VFSSEQLRYP KGDGSVCLQK SFVGEGVRLD CSGGFGAVMM
VTATFGMVAA SKAIEKLVAG ARRPSERVKP E