| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1526 |
|---|
| Symbol | |
|---|
| ID | 1045487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1731274 |
|---|
| End bp | 1733865 |
|---|
| Gene Length | 2592 bp |
|---|
| Protein Length | 863 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637144926 |
|---|
| Product | beta-(1-3)-glucosyl transferase, putative |
|---|
| Protein accession | NP_743683 |
|---|
| Protein GI | 26988258 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG5309] Exo-beta-1,3-glucanase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.166405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCAC GTAAATTCGG CCTGAACCTG GTAGTGGTGC TGGCCATCGC CGCACTGTTC
ACCGGGTTCT GGGCACTGAT CAACCGCCCG GTCTCCGCCC CCGCCTGGCC AGAACAGATC
TCTGGCTTTT CGTATTCGCC GTTCCGCCTG GGCGAAAGCC CACAGAAGGG TCAGTACCCC
ACTGACGACG AAATGCGCCA GGACCTGGAG CAACTGAGCA AACTGACCGA CAGCATCCGT
ATCTATACCG TGGAAGGCAC CCAGGCCGAC GTCCCGCGCC TGGCCGAGGA GTTCGGCCTG
CGGGTGACGC TGGGGATATG GATCAGCCCG GACCTGGAGC GCAACGAGCG CGAAATTGCC
ACGGCCATCC AGCTGGCCAA CACGTCGCGC AGCGTGGTGC GGGTGGTGGT CGGCAACGAG
GCGCTGTTCC GTGAAGAAGT CACACCGGAA AACCTGATCA AATACCTGGA CCGCGTACGC
GCAGCCGTGA AGGTGCCCGT GACCACCAGT GAACAGTGGC ACATCTGGAA GGAACATCCT
GAGCTGGCCA GGCACGTCGA CCTGATTGCC GCGCACATCC TGCCCTACTG GGAGTTCGTG
CCGATGAAGG ATTCGGTCGA GTTCGTCCTC GAGCGCGCCC GTGAACTGAA GCACCAGTTC
CCGCGCAAAC CTCTGCTGCT GTCGGAAGTC GGCTGGCCGA GCAACGGCCG CATGCGCGGT
GGTGCCGATG CCACACAGGC CGACCAGGCC ATCTACTTGC GCACCCTGGT CAATACCCTC
AACCGCCGTG GCTACAACTA CTTTGTCATT GAAGCCTATG ACCAACCCTG GAAGGCCAGC
GACGAAGGAT CGGTAGGCGC CTACTGGGGC GTCTACAACG CCGAGCGCCA GCAGAAGTTC
AACTTCGACG GCCCCGTGGT GGCGATCCCG CAGTGGCGGG CCCTGGCAGT GGCGTCGGTG
GTGCTGGCAA TGATCGCCTT GATGGTGCTG TTCATCGATG GCTCGGCCCT GCGCCAGCGT
GGCCGTACCT TCCTGACGTT CATCACCTTC CTGTGCGGGT CGGTGCTGGT GTGGATCGCC
TACGACTACA GCCAGCAATA CAGCACCTGG TTCAGCCTGA CCGTGGGCGT GCTGCTGGCC
CTCGGCGCGC TGGGTGTGTT CATCGTGCTG CTCACCGAGG CCCACGAACT GGCCGAGGCG
GTCTGGATAC ACAAGCGCCG CCGCGAGTTC CTGCCCGTGC AGGCCGACAC TGCCTACCGG
CCCAAGGTGT CGGTGCATGT GCCGTGCTAC AACGAGCCAC CTGAGATGGT GAAACAGACC
CTGGACGCCC TGGCCGCCCT GGACTACCCC GACTACGAAG TGCTGGTGAT CGACAACAAC
ACCAAGGACC CGGCCGTGTG GGAGCCGCTC AAGGCCCACT GCGAAAAGCT TGGCGAGCGC
TTCAAGTTCT TCCACGTCGC GCCACTGGCC GGCTTCAAGG GTGGCGCGCT GAATTACCTG
ATCCCGCACA CGGCAAAGGA CGCCGAAGTG ATCGCGGTAA TCGACTCGGA CTACTGCGTC
GACCGCAACT GGCTCAAGCA CATGGTGCCG CACTTCGCCG ACCCGAAAAT TGCCGTGGTG
CAGTCACCGC AGGATTACCG TGACCAGCAC GAAAGCGCCT TCAAGAAGCT GTGCTACAGC
GAATACAAGG GCTTCTTCCA CATCGGTATG GTCACCCGCA ACGACCGTGA CGCGATCATC
CAGCACGGCA CCATGACCAT GACCCGGCGC AGTGTGCTGG AAGAACTGGG CTGGGCCGAG
TGGTGCATCT GCGAGGACGC CGAACTGGGC CTGCGCGTGT TCGAGAAAGG CCTGTCCGCC
GCCTACGCCC ACAACAGCTA CGGCAAGGGC CTGATGCCCG ACACCTTCAT CGACTTCAAG
AAGCAACGCT TCCGCTGGGC CTACGGCGCC ATCCAGATCA TCAAGCACCA CGCCGGCGCG
CTGCTGCGCG GCAAAGGCAG CCAGCTGACC CGTGGCCAGC GCTACCACTT CCTGGCCGGC
TGGCTACCGT GGATCGCCGA TGGCATGAAC ATCTTCTTCA CCATCGGCGC GCTGTTGTGG
TCGGCGGCGA TGATCATCGT GCCGCATCGG GTCGATCCGC CCCTGATGAT CTTCGCCATC
CCGCCGCTGG CGCTGTTCTT CTTCAAGGTC GGCAAGATCA TCTTCCTGTA CCGCCGAGCG
GTGGGGGTGA ACCTCAAGGA TGCCTTCGCA GCTGCGCTGG CCGGGCTGGC ACTGTCGCAC
ACCATCGCCA AGGCGGTACT GTATGGTTTC TTCACCAGCA GCATGCCGTT CTTCCGCACG
CCGAAGAACG CTGACAGCCA TGGGTTGCTG GTGGCGATTT CCGAAGCCCG TGAAGAGCTG
TTCATCATGG TGCTGCTGTG GGGCGCGGCG TTGGGTATCT ACCTGGTGCA GGGGCTGCCG
AGTTCGGACA TGCGCTTCTG GGTGGCGATG TTGCTGGTGC AGTCGTTGCC TTATGTGGCA
GCGCTGGTGA TGGCGTTCCT GTCGTCGCTG CCCAAGCCCG CAGAAAAGGC TGCCCAAGCG
CAGCAGGCTT GA
|
|---|
| Protein sequence | MSSRKFGLNL VVVLAIAALF TGFWALINRP VSAPAWPEQI SGFSYSPFRL GESPQKGQYP
TDDEMRQDLE QLSKLTDSIR IYTVEGTQAD VPRLAEEFGL RVTLGIWISP DLERNEREIA
TAIQLANTSR SVVRVVVGNE ALFREEVTPE NLIKYLDRVR AAVKVPVTTS EQWHIWKEHP
ELARHVDLIA AHILPYWEFV PMKDSVEFVL ERARELKHQF PRKPLLLSEV GWPSNGRMRG
GADATQADQA IYLRTLVNTL NRRGYNYFVI EAYDQPWKAS DEGSVGAYWG VYNAERQQKF
NFDGPVVAIP QWRALAVASV VLAMIALMVL FIDGSALRQR GRTFLTFITF LCGSVLVWIA
YDYSQQYSTW FSLTVGVLLA LGALGVFIVL LTEAHELAEA VWIHKRRREF LPVQADTAYR
PKVSVHVPCY NEPPEMVKQT LDALAALDYP DYEVLVIDNN TKDPAVWEPL KAHCEKLGER
FKFFHVAPLA GFKGGALNYL IPHTAKDAEV IAVIDSDYCV DRNWLKHMVP HFADPKIAVV
QSPQDYRDQH ESAFKKLCYS EYKGFFHIGM VTRNDRDAII QHGTMTMTRR SVLEELGWAE
WCICEDAELG LRVFEKGLSA AYAHNSYGKG LMPDTFIDFK KQRFRWAYGA IQIIKHHAGA
LLRGKGSQLT RGQRYHFLAG WLPWIADGMN IFFTIGALLW SAAMIIVPHR VDPPLMIFAI
PPLALFFFKV GKIIFLYRRA VGVNLKDAFA AALAGLALSH TIAKAVLYGF FTSSMPFFRT
PKNADSHGLL VAISEAREEL FIMVLLWGAA LGIYLVQGLP SSDMRFWVAM LLVQSLPYVA
ALVMAFLSSL PKPAEKAAQA QQA
|
|---|
| |