| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1522 |
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| Symbol | cspA-1 |
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| ID | 1045491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1728393 |
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| End bp | 1728602 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637144922 |
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| Product | cold shock protein CspA |
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| Protein accession | NP_743679 |
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| Protein GI | 26988254 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.310546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.49084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGTCTC GTGAGACTGG GAATGTAAAG TGGTTCAACG ATGCCAAGGG TTATGGCTTC
ATTCAGCGCG AAGGTGGTGC GGATGTATTC GTCCACTATC GGGCGATCCG CGGTGAGGGG
CATCGTACCC TGGTCGAAGG GCAGCGGGTG GAGTACGCCT GCGTGCAGGG CCAGAAAGGC
CTGCAAGCCG AAGACGTAGT GGGCCTCTGA
|
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| Protein sequence | MSSRETGNVK WFNDAKGYGF IQREGGADVF VHYRAIRGEG HRTLVEGQRV EYACVQGQKG
LQAEDVVGL
|
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