Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1518 |
Symbol | |
ID | 1045497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1724478 |
End bp | 1725164 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144918 |
Product | hypothetical protein |
Protein accession | NP_743675 |
Protein GI | 26988250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.49547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.73861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA CTTCCCTGCG CTTCACCACC CTGTGCGCCG GCCTGCTGCT GTCGGCCAGT GCCCTGGCCC TGTCGCTGGG CGACCTCAGC CAGAAAGATG CCACCGGCGG CCTGAAAGAT GCCCTGACCC AAGGTGCGCA ACTGGCCGTC AAGCAACTGA GCACCCCAGG CGGCTTCAGC AACAACCCGG ACGTGCGCAT CGAGCTGCCA GGCAACCTGG GCAAAGCCGC CAAGGCGATG AAGATGTTCG GCAAGGGTGA ACAGGTCGAA GCCCTGGAAA CCAGCATGAA CAAAGCCGCC GAGGCCGCCG TGCCGCAGGC CCAGGCGATT CTGGTGGATG CCGTGAAGAA CATGAGCGTG ACCGATGCCA AGGGCATTCT CAGCGGCGGT GACGACTCGG CCACCCAGTA CCTGAACAAG AGCAGCCGCG AGCAGATCCG CGCCAAGTTC CTGCCAATCG TCAAGCAGGC CACCGACAAG GTTGGCGTGG CCCAGCAGTA CAATGCCTTC GCCGCTCAGG CCAAAGGCCT GGGGCTGGTC AAGGATGACG CCAATATCGA GAACTACGTG ACCGAGAAGG CGCTGGATGG CCTGTTCGAG ATGATCGGCA AACAGGAGCA GAACATTCGC CAGAACCCGG CAGCGGCGGC TACCAGCCTG GCCAAGAAGG TCTTCGGCGC GCTGTAG
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Protein sequence | MIRTSLRFTT LCAGLLLSAS ALALSLGDLS QKDATGGLKD ALTQGAQLAV KQLSTPGGFS NNPDVRIELP GNLGKAAKAM KMFGKGEQVE ALETSMNKAA EAAVPQAQAI LVDAVKNMSV TDAKGILSGG DDSATQYLNK SSREQIRAKF LPIVKQATDK VGVAQQYNAF AAQAKGLGLV KDDANIENYV TEKALDGLFE MIGKQEQNIR QNPAAAATSL AKKVFGAL
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