Gene PP_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1518 
Symbol 
ID1045497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1724478 
End bp1725164 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content63% 
IMG OID637144918 
Producthypothetical protein 
Protein accessionNP_743675 
Protein GI26988250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.49547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.73861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA CTTCCCTGCG CTTCACCACC CTGTGCGCCG GCCTGCTGCT GTCGGCCAGT 
GCCCTGGCCC TGTCGCTGGG CGACCTCAGC CAGAAAGATG CCACCGGCGG CCTGAAAGAT
GCCCTGACCC AAGGTGCGCA ACTGGCCGTC AAGCAACTGA GCACCCCAGG CGGCTTCAGC
AACAACCCGG ACGTGCGCAT CGAGCTGCCA GGCAACCTGG GCAAAGCCGC CAAGGCGATG
AAGATGTTCG GCAAGGGTGA ACAGGTCGAA GCCCTGGAAA CCAGCATGAA CAAAGCCGCC
GAGGCCGCCG TGCCGCAGGC CCAGGCGATT CTGGTGGATG CCGTGAAGAA CATGAGCGTG
ACCGATGCCA AGGGCATTCT CAGCGGCGGT GACGACTCGG CCACCCAGTA CCTGAACAAG
AGCAGCCGCG AGCAGATCCG CGCCAAGTTC CTGCCAATCG TCAAGCAGGC CACCGACAAG
GTTGGCGTGG CCCAGCAGTA CAATGCCTTC GCCGCTCAGG CCAAAGGCCT GGGGCTGGTC
AAGGATGACG CCAATATCGA GAACTACGTG ACCGAGAAGG CGCTGGATGG CCTGTTCGAG
ATGATCGGCA AACAGGAGCA GAACATTCGC CAGAACCCGG CAGCGGCGGC TACCAGCCTG
GCCAAGAAGG TCTTCGGCGC GCTGTAG
 
Protein sequence
MIRTSLRFTT LCAGLLLSAS ALALSLGDLS QKDATGGLKD ALTQGAQLAV KQLSTPGGFS 
NNPDVRIELP GNLGKAAKAM KMFGKGEQVE ALETSMNKAA EAAVPQAQAI LVDAVKNMSV
TDAKGILSGG DDSATQYLNK SSREQIRAKF LPIVKQATDK VGVAQQYNAF AAQAKGLGLV
KDDANIENYV TEKALDGLFE MIGKQEQNIR QNPAAAATSL AKKVFGAL