Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1511 |
Symbol | |
ID | 1045507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1715881 |
End bp | 1716570 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637144911 |
Product | extensin family protein |
Protein accession | NP_743668 |
Protein GI | 26988243 |
COG category | [S] Function unknown |
COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.497355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGCAT TGCTGGCGCT ACTGGCCGGC CTGCTGACGG TGGCCGGCCT GGTCTGGCAC TTCGGCTGGC GCCTGCCTGC CACATGGAAC CCCTGGGCGC CGCTGGACGT ACGCCAGCCG CCCAACCTGC TGACCCCCTA CAAACTGTCG CGCCTACGCG ATGACCCAAC GCTGTGCCGG CAGGCGCTGG AAACCAGCCA CCTGCGTTAC CGGGCACAAG CCGACAGCCC GGCGTCGGCC AACTGCCCGC TGCAGAACGT ATGGCGCATC GAGGGCGGCC AGGCGCGGCT GAGCAGCAGC TTTCTGGCCA GTTGCCCGGT GGCGGTGGCC TATGCACTGT TCGAAAACCA TGGCTTGCAG CCGGCGGCGC AGGAGGTGTT TGGGCAACCG GTGACGCAGG TCGATCACTT GGGCAGCTTT GCCTGCCGCA ACGTCTACCA CCGCAAGCAG GGCAGTTTGA GCCAGCACGC CACGGCCAAT GCGCTGGACA TCAGCGGTTT TCGCCTGAAG GACGGCCAGC GCATTATCCT GGCGCGTGAC TGGCAGGCGG GCGGGCAGAA GGCGGAATTC TTGCGTCAGG TGCAGCAGGC CGCTTGCGAG AGCTTCAGCA CGGTACTGGG GCCGGATTAC AACGCTGCGC ACCGCAACCA CTTTCACCTG GACATGGGGC GCTGGCAGAT CTGTCGTTAG
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Protein sequence | MRALLALLAG LLTVAGLVWH FGWRLPATWN PWAPLDVRQP PNLLTPYKLS RLRDDPTLCR QALETSHLRY RAQADSPASA NCPLQNVWRI EGGQARLSSS FLASCPVAVA YALFENHGLQ PAAQEVFGQP VTQVDHLGSF ACRNVYHRKQ GSLSQHATAN ALDISGFRLK DGQRIILARD WQAGGQKAEF LRQVQQAACE SFSTVLGPDY NAAHRNHFHL DMGRWQICR
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