Gene PP_1511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1511 
Symbol 
ID1045507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1715881 
End bp1716570 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID637144911 
Productextensin family protein 
Protein accessionNP_743668 
Protein GI26988243 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.497355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCAT TGCTGGCGCT ACTGGCCGGC CTGCTGACGG TGGCCGGCCT GGTCTGGCAC 
TTCGGCTGGC GCCTGCCTGC CACATGGAAC CCCTGGGCGC CGCTGGACGT ACGCCAGCCG
CCCAACCTGC TGACCCCCTA CAAACTGTCG CGCCTACGCG ATGACCCAAC GCTGTGCCGG
CAGGCGCTGG AAACCAGCCA CCTGCGTTAC CGGGCACAAG CCGACAGCCC GGCGTCGGCC
AACTGCCCGC TGCAGAACGT ATGGCGCATC GAGGGCGGCC AGGCGCGGCT GAGCAGCAGC
TTTCTGGCCA GTTGCCCGGT GGCGGTGGCC TATGCACTGT TCGAAAACCA TGGCTTGCAG
CCGGCGGCGC AGGAGGTGTT TGGGCAACCG GTGACGCAGG TCGATCACTT GGGCAGCTTT
GCCTGCCGCA ACGTCTACCA CCGCAAGCAG GGCAGTTTGA GCCAGCACGC CACGGCCAAT
GCGCTGGACA TCAGCGGTTT TCGCCTGAAG GACGGCCAGC GCATTATCCT GGCGCGTGAC
TGGCAGGCGG GCGGGCAGAA GGCGGAATTC TTGCGTCAGG TGCAGCAGGC CGCTTGCGAG
AGCTTCAGCA CGGTACTGGG GCCGGATTAC AACGCTGCGC ACCGCAACCA CTTTCACCTG
GACATGGGGC GCTGGCAGAT CTGTCGTTAG
 
Protein sequence
MRALLALLAG LLTVAGLVWH FGWRLPATWN PWAPLDVRQP PNLLTPYKLS RLRDDPTLCR 
QALETSHLRY RAQADSPASA NCPLQNVWRI EGGQARLSSS FLASCPVAVA YALFENHGLQ
PAAQEVFGQP VTQVDHLGSF ACRNVYHRKQ GSLSQHATAN ALDISGFRLK DGQRIILARD
WQAGGQKAEF LRQVQQAACE SFSTVLGPDY NAAHRNHFHL DMGRWQICR