Gene PP_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1500 
Symbol 
ID1045520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1705932 
End bp1706855 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID637144900 
Productputative lipoprotein 
Protein accessionNP_743657 
Protein GI26988232 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.313802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCCGA CTACGCGAAC ATTCTCTGAG CACTGCCGCC TGCTCGTCCT CGGCCTGGCC 
CTGCTGAGCC TTGGCGGCTG CAGCAGCCTG TTGTTCTACC CCGAGCGTGG TCAGGCCTTC
ACCCCTGAGC GTGCCAAGCT GGAATACCGC GATGTCACGC TGACCACTGC TGATGGCATC
CGCCTTCACG GTTGGTGGCT GCCAGCCAAG GCCGGGGTCG AGGTCAAGGG CACGGTGCTG
CACCTTCACG GCAACGGCGG TAACCTGCCA GGGCACCTGG GGGGTAGCTA CTGGCTGCCG
GAGCAGGGCT ACCAGGTGCT GATGATCGAT TACCGCGGCT ATGGCTTGTC TCAGGGCCAG
CCGAGCCTGC CGGAGGTGTA CCAGGACATT GCTGCAGCCA TGGCCTGGCT GCAGCAGGCG
CCCGAGGTCA AGGGCAAGCC GCTGGTACTG CTGGGGCAGA GCCTGGGCGG TGCCATGGCC
ATTCATTACC TGGCGGCCCA CCCCGAGCAG CGTCAGCGCT TCAGCGCCCT GGTGTTCGAT
GGTGTGCCGG CCAGTTACCG CGCGGTGGGG CGCTTTGCGC TCAGCACCTC CTGGATGACC
TGGCCATTGC AGGTTCCGCT GTCGTGGCTG GTGCCGGACG GCGACAGCGC GATCCGCTCG
ATCGAGCGAT TGAGCAGCCC GCCCAAGTTG TTTTTCCACA GCATCGACGA CAACCTGGTG
CCGATGGACA ACGGCATCCG CCTGTATCAG CACGCGCCAC CACCGCGGGT GCTGCAACTG
ACCCGAGGGG GGCACGTGCA GACCTTCGCC GACCCTACCT GGCGCCAGGT GATGCTGCGG
TTCCTCGATG ATCCCAGCCA TTTCAACGGC CTGCGGCGGC TTGCCGAAGT GCCCAATTTC
CCTGACGAGA AGAACAAGCA ATGA
 
Protein sequence
MKPTTRTFSE HCRLLVLGLA LLSLGGCSSL LFYPERGQAF TPERAKLEYR DVTLTTADGI 
RLHGWWLPAK AGVEVKGTVL HLHGNGGNLP GHLGGSYWLP EQGYQVLMID YRGYGLSQGQ
PSLPEVYQDI AAAMAWLQQA PEVKGKPLVL LGQSLGGAMA IHYLAAHPEQ RQRFSALVFD
GVPASYRAVG RFALSTSWMT WPLQVPLSWL VPDGDSAIRS IERLSSPPKL FFHSIDDNLV
PMDNGIRLYQ HAPPPRVLQL TRGGHVQTFA DPTWRQVMLR FLDDPSHFNG LRRLAEVPNF
PDEKNKQ