Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1496 |
Symbol | lysS |
ID | 1045667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1701645 |
End bp | 1703147 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144896 |
Product | lysyl-tRNA synthetase |
Protein accession | NP_743653 |
Protein GI | 26988228 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.103111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.804947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC TCAAGACCGA ATCGCAAGAC CTGCAACAGG AAGAAAACGC CCTGATCGCC CTGCGCAAGG AAAAACTTGC CGCCGAGCGT GCCAAGGGCA ATGCCTTCCC CAACGACTTC CGTCGCGACA GCTACTGCAA CGACCTGCAG AAGCAATACG CGGACAAGAC CAAGGAAGAG CTGGAAGCAG CCGCGATCCC GGTCAAGGTC GCCGGCCGCA TCATGCTCAA CCGTGGTTCG TTCATGGTTA TCCAGGACAT GACTGGCCGT ATTCAGGTCT ACGTCAACCG CAAGACCCTG CCGGAAGAAA CCCTGGCCGC GGTCAAGACC TGGGACCTGG GCGACATCAT CAGCGCCGAA GGCACCCTGG CCCGTTCCGG CAAGGGCGAC CTGTACGTCG AAATGACCAA CGTGCGCCTG CTGACCAAGT CGCTGCGCCC GCTGCCCGAC AAGCACCACG GCCTGACCGA CACCGAGCAG CGCTACCGCC AGCGCTACGT CGACCTGATG GTCAACGAAG AAACCCGCCA CACCTTCCGT GTGCGTTCGC AGGTGATCTC GCACATCCGC AAGTTCCTCA TCGAGCGTGA CTTCCTCGAA GTCGAGACGC CGATGCTGCA GACCATCCCG GGCGGCGCCG CTGCCAAGCC GTTCGAAACC CACCACAATG CCCTGGACAT GGCCATGTTC CTGCGTATCG CGCCGGAGCT GTACCTCAAG CGTCTGGTGG TTGGTGGTTT TGAGAAAGTG TTCGAGATCA ACCGTAACTT CCGTAACGAA GGCGTTTCGA CTCGTCACAA CCCTGAATTC ACCATGCTCG AGTTCTACCA GGCCTACGCC GACTACCGCG ACAACATGGA CCTCACCGAG GAACTGTTCC GCGAGCTGGC GCAACTGGTA CTGGGCTCCA CTGACGTACC GTACGGCGAC AAGGTCTTCC ACTTCGGCGA GCCGTTCGTG CGCCTGTCGG TGTTCGACTC GATCCTCAAG TACAACCCGG AGCTGACCGC CGCCGACCTG CAGGACGTCG ACCGCGCCCG CGAGATTGCC AGGAAGGCCG GCGCCAAGGT GCTGGGCCAT GAAGGCCTGG GCAAGCTGCA GGTGATGATT TTCGAAGAGC TGGTCGAGCA CAAGCTGGAA CAGCCGCACT TCATTACCGA GTACCCGTTC GAAGTGTCGC CGTTGGCCCG TCGCAACGAC GACAACCCGG CCGTTACCGA CCGTTTCGAG CTGTTCATCG GTGGCCGCGA AATCGCCAAC GCCTACTCCG AGCTCAACGA TGCCGAAGAT CAGGCCGAGC GCTTCCTGGC CCAGGTGGCC GAGAAGGACG CGGGTGACGA TGAAGCCATG CACTATGACG CCGACTTCGT TCGTGCGCTG GAGTACGGCA TGCCGCCGAC CGCCGGTGAA GGCATCGGCA TCGACCGCCT GGTGATGCTG CTGACCAACT CGCCGTCGAT CCGCGACGTC ATCCTGTTCC CGCACATGCG TCCGCAGGCC TGA
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Protein sequence | MSDLKTESQD LQQEENALIA LRKEKLAAER AKGNAFPNDF RRDSYCNDLQ KQYADKTKEE LEAAAIPVKV AGRIMLNRGS FMVIQDMTGR IQVYVNRKTL PEETLAAVKT WDLGDIISAE GTLARSGKGD LYVEMTNVRL LTKSLRPLPD KHHGLTDTEQ RYRQRYVDLM VNEETRHTFR VRSQVISHIR KFLIERDFLE VETPMLQTIP GGAAAKPFET HHNALDMAMF LRIAPELYLK RLVVGGFEKV FEINRNFRNE GVSTRHNPEF TMLEFYQAYA DYRDNMDLTE ELFRELAQLV LGSTDVPYGD KVFHFGEPFV RLSVFDSILK YNPELTAADL QDVDRAREIA RKAGAKVLGH EGLGKLQVMI FEELVEHKLE QPHFITEYPF EVSPLARRND DNPAVTDRFE LFIGGREIAN AYSELNDAED QAERFLAQVA EKDAGDDEAM HYDADFVRAL EYGMPPTAGE GIGIDRLVML LTNSPSIRDV ILFPHMRPQA
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