| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1478 |
|---|
| Symbol | |
|---|
| ID | 1045742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1683418 |
|---|
| End bp | 1684524 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637144879 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | NP_743636 |
|---|
| Protein GI | 26988211 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.139205 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC TGCTCGAGCC TTACACCCTG CGTCAGCTGA CGCTGCCCAA CCGCATCGCG
GTCTCGCCGA TGTGCCAGTA TTCCGCCATC GATGGCCTGG CCAACGATTG GCATCTCGTT
CACTTGGGCT GCCGCGCCGT GGGTGGCGCT GGCCTGGTCA TCAGCGAAGC CGTTGCGGTG
ACTGCCGATG GTCGCATCAC CGCCGAAGAC CTAGGCTTGT GGAACGACGA CCAGATCGTC
CCGTTGCAGC GCATCACCCG TTTCATTACT GCGCAAGGCG CCGTGCCGGG TATCCAGTTG
GCCCACGCCG GGCGCAAGGC CAGTACCTAT CGGCCCTGGC TGGGCAAGCA GGGCAGCGTG
AAGCTCGAAG ACGGCGGCTG GCAGCCCGTG GGGCCGTCGA AAATCGCCTT CGACCCGCAG
CACACACCGC CACGCGAGTT GAGCAAGGAC GAAATCCAGG ACGTGATCGA CGCCTTCGTC
GCATCGACCG AGCGGGCGCT CAAGGCCGGC TTCAAGGTGG TCGAGATCCA CGCTGCCCAT
GGTTATCTGC TGCACCAGTT TCTCTCACCG CTGAGCAACC AGCGCCGTGA CGAATACGGC
AGTTGCTTCG AGAATCGAAT CCGCCTGACC CTGCAGGTGG TGGAGGCCGT GCGCAAGGTC
TGGCCGGCCG AATTGCCGCT GTTCGTGCGG GTATCGGCGA CTGACTGGGT CGAGGACGGC
TGGAACCCGG ATGAAACCGT CGAACTGGCT CGTCGCCTGC GGGTGCTGGG TGTCGACCTG
ATCGATGTGT CCTCCGGTGG TACCTCGGTC AACGCCGAAA TTCCTACAGG CCCTGGCTAT
CAGACGCGCT TTGCAGAGCG CGTGCGCAAG GAAGCAGAGA TCGCCACCGG CACCGTCGGC
ATGATCACTG AACCTGCCCA GGCCGAGCAC ATTCTGCGTA CCGGGCAGGC CGACGTGATC
TTCCTGGCTC GGGAGCTGCT GCGCGATCCT TACTGGCCGC TGCATGCCGA TGATGATCTG
GGTGGCAACA AGGCCACTTG GCCGGCGCAG TACCAAAGGG CGACCAGCCG CGCCAATCCG
ATACATGAGT CGGACTTGCG GGATTAA
|
|---|
| Protein sequence | MSLLLEPYTL RQLTLPNRIA VSPMCQYSAI DGLANDWHLV HLGCRAVGGA GLVISEAVAV
TADGRITAED LGLWNDDQIV PLQRITRFIT AQGAVPGIQL AHAGRKASTY RPWLGKQGSV
KLEDGGWQPV GPSKIAFDPQ HTPPRELSKD EIQDVIDAFV ASTERALKAG FKVVEIHAAH
GYLLHQFLSP LSNQRRDEYG SCFENRIRLT LQVVEAVRKV WPAELPLFVR VSATDWVEDG
WNPDETVELA RRLRVLGVDL IDVSSGGTSV NAEIPTGPGY QTRFAERVRK EAEIATGTVG
MITEPAQAEH ILRTGQADVI FLARELLRDP YWPLHADDDL GGNKATWPAQ YQRATSRANP
IHESDLRD
|
|---|
| |