Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1470 |
Symbol | hom |
ID | 1045758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1674830 |
End bp | 1676134 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144871 |
Product | homoserine dehydrogenase |
Protein accession | NP_743628 |
Protein GI | 26988203 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.219263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACCGG TCAAAGTAGG CATCTGTGGG TTGGGGACCG TCGGTGGCGG AACCTTCAAT GTACTTCAGC GCAACGCCGA GGAGATTGCC CGCCGTGCCG GGCGCGGTAT TGAAGTGGCA CAGATCGCCA TGCGCTCGCA GAACCCGAAC TGCCAGATTA CCGGTACCCC CATTACCGCT GACGTGTTCG AAGTTGCAAG CAACCCGGAG ATCGACATTG TCATCGAGCT GATCGGTGGC TATACCATCG CCCGCGACCT GGTGCTGAAG GCCATCGAAA ACGGCAAGCA CGTGGTCACC GCCAACAAGG CGCTGATTGC CGTGCATGGC AACGAAATCT TCGCCAAAGC CCGCGAGAAA GGCGTGATTG TTGCGTTCGA GGCGGCCGTA GCCGGTGGCA TCCCGGTGAT CAAGGCCATC CGCGAAGGCC TGTCGGCCAA CCGCATCAAC TGGCTGGCCG GCATCATCAA CGGCACCGGC AACTTCATCC TCACCGAAAT GCGTGAGAAG GGCCGTGCCT TCCCGGACGT GCTGGCTGAA GCCCAGGCGC TGGGCTACGC CGAAGCCGAC CCGACCTTCG ACGTGGAAGG CATCGACGCT GCGCACAAGC TGACGATTCT GGCGTCCATC GCGTTCGGTA TCCCGCTGCA GTTCGACAAG GCCTACACCG AAGGTATCAC CCAGCTGACA ACGGCAGACG TGAACTACGC CGAAGCCTTG GGTTACCGCA TCAAGCACCT GGGCGTGGCG CGTCGCACCG CCGAAGGTAT CGAGTTGCGC GTGCACCCGA CGCTGATCCC GGCCGACCGT CTGATCGCCA ACGTCAACGG CGTGATGAAC GCTGTCATGG TCAACGGTGA TGCTGCCGGC TCCACCCTGT ACTACGGTGC TGGCGCGGGT ATGGAGCCTA CCGCTTCGTC AGTGGTCGGC GACCTGGTCG ACGTGGTCCG TGCCATGACC TCCGACCCGG AGAACCGTGT GCCGCACCTG GCATTCCAGC CAGACTCGCT GTCGGCCCAC CCGATCCTGC CGATCGAAGC CTGCGAAAGC GCCTACTACC TGCGCATCCA GGCCAAGGAT CACCCGGGCG TACTGGCCCA GGTCGCCAGC ATCCTCTCGG AGCGCGGTAT CAACATCGAG TCGATCATGC AGAAGGAAGC CGAGGAGCAG GACGGCCTGG TGCCAATGAT CCTGGTGACC CATGGCGTGG TCGAGCAGCG TATCAATGAC GCCATCGTCG CTCTGGAAGC CCTGCAGGAC GTGGTCGGCA AGGTTGTGCG CATTCGCGTC GAGCAGCTCA ACTAA
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Protein sequence | MKPVKVGICG LGTVGGGTFN VLQRNAEEIA RRAGRGIEVA QIAMRSQNPN CQITGTPITA DVFEVASNPE IDIVIELIGG YTIARDLVLK AIENGKHVVT ANKALIAVHG NEIFAKAREK GVIVAFEAAV AGGIPVIKAI REGLSANRIN WLAGIINGTG NFILTEMREK GRAFPDVLAE AQALGYAEAD PTFDVEGIDA AHKLTILASI AFGIPLQFDK AYTEGITQLT TADVNYAEAL GYRIKHLGVA RRTAEGIELR VHPTLIPADR LIANVNGVMN AVMVNGDAAG STLYYGAGAG MEPTASSVVG DLVDVVRAMT SDPENRVPHL AFQPDSLSAH PILPIEACES AYYLRIQAKD HPGVLAQVAS ILSERGINIE SIMQKEAEEQ DGLVPMILVT HGVVEQRIND AIVALEALQD VVGKVVRIRV EQLN
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