| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1465 |
|---|
| Symbol | rplS |
|---|
| ID | 1045765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1670223 |
|---|
| End bp | 1670573 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637144866 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | NP_743623 |
|---|
| Protein GI | 26988198 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0559636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.290226 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACA AGATCATCCA GCAGCTCGAA GCCGAGCAGA TGAGCAAGGA AATCCCGACC
TTCGCACCAG GCGACACCGT TGTCGTTCAG GTTAAAGTGA AGGAAGGTGA GCGTTCCCGT
CTGCAGGCGT TCGAAGGCGT CGTTATCGCC AAGCGTAACC GCGGTCTGAA CAGCGCCTTC
ACCGTGCGCA AGATCTCCAG CGGCGTTGGC GTAGAGCGTA CCTTCCAGAC CTACAGCCCG
CAAATCGACA GCCTGGCCGT GAAACGTCGT GGTGACGTGC GTAAAGCCAA GCTGTACTAC
CTGCGCGACC TGTCCGGCAA AGCCGCTCGC ATCAAGGAAA AACTGTCCTG A
|
|---|
| Protein sequence | MTNKIIQQLE AEQMSKEIPT FAPGDTVVVQ VKVKEGERSR LQAFEGVVIA KRNRGLNSAF
TVRKISSGVG VERTFQTYSP QIDSLAVKRR GDVRKAKLYY LRDLSGKAAR IKEKLS
|
|---|
| |