| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1462 |
|---|
| Symbol | rpsP |
|---|
| ID | 1045775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1668631 |
|---|
| End bp | 1668882 |
|---|
| Gene Length | 252 bp |
|---|
| Protein Length | 83 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637144863 |
|---|
| Product | 30S ribosomal protein S16 |
|---|
| Protein accession | NP_743620 |
|---|
| Protein GI | 161378134 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.065689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.177487 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACCA TTCGTCTGGC CCGTGGCGGC TCGAAAAAGC GCCCATTCTA CCACCTGACC
GTGACCAACT CGCGTAACGC CCGTGACGGC CGTTTCGTTG AGCGCGTAGG TTTCTTCAAC
CCAATCGCTG CTGGCGCCGA AGTTAAGCTG TCGGTCAACC AAGAGCGCGT CACCTACTGG
CTGAGCCAGG GTGCACAGCC GTCTGAGCGT GTTGCTCAGC TGCTGAAGGA AGCTGCCAAG
GCCGCTGCCT GA
|
|---|
| Protein sequence | MVTIRLARGG SKKRPFYHLT VTNSRNARDG RFVERVGFFN PIAAGAEVKL SVNQERVTYW
LSQGAQPSER VAQLLKEAAK AAA
|
|---|
| |