Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1460 |
Symbol | |
ID | 1045782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1665873 |
End bp | 1666724 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144861 |
Product | cytochrome c assembly protein |
Protein accession | NP_743618 |
Protein GI | 26988193 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.164878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAACT CCGTCTCTTT AAAGGCTCGC CAACCAGGAC TTATGTTCTC CTCACCCAGC CTCATCCCCA ACCTGATCGC AGCCGGCCTA TATATAGCGG CGGCCATCTA CCAGGGCTCA TACCTGTCCC AGGGCCGCAA GGCCGAAAAG CGCCTGCTTG GCCTGCTGGG TGCCATCGCG GTCCTGGCCC AGGCCGGTGC ACTGTTCTTC CAGCTGATCA CCCCGCTGGG CCTGAGCCTG GACTTCTTCA GCGCCGCCAG CCTGATCGCC GTGGCGGTCA TCTCCCTGAC CCTGCTGGCC TGCCTGCGCA TACCCGTGGA AAACCTGCTG GTGCTGCTGT TCCCGCTGGG TGCGGTGACC GCGCTGCTGG CCCAGTTCGC CCCCCCCGGC ACGGTACCGC TGATCAACGA AGAACCCGGC ATCCTTGCGC ACATCCTGTT GTCGATCCTG GCCTACGGGC TGTTCACCAT CGCGGTGTTC CAGTCGCTGC TGTTGCTGCT GCAGGACCGC CAGCTGAAGA ACAAGCACCC GTCCGGGCTG ATCCGCAACT TCCCGCCACT GCAAACCATG GAAAGCCTGC TGTTCGGCTT CCTCTGGGCC GGCTGGTGCC TGCTGTCGCT GTCGCTGATC TCCGGCTGGC TGTTCCTCGA CAACCTGTTC GCCCAGCACC TGGCGCACAA GACCTTGCTG GCCTGTGTCG CCTGGGTGGT GTTCAGCGTG CTGCTGTGGG GCCGCACCCG CCTGGGTTGG CGGGGCCACA TGGCCATCCG CTGGACGCTG AGCGGTTTCT GCCTGCTGAT GCTGGCCTAT TTCGGCAGCA AGCTGGTTCG CGAATTCATC TTGCATATCT GA
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Protein sequence | MPNSVSLKAR QPGLMFSSPS LIPNLIAAGL YIAAAIYQGS YLSQGRKAEK RLLGLLGAIA VLAQAGALFF QLITPLGLSL DFFSAASLIA VAVISLTLLA CLRIPVENLL VLLFPLGAVT ALLAQFAPPG TVPLINEEPG ILAHILLSIL AYGLFTIAVF QSLLLLLQDR QLKNKHPSGL IRNFPPLQTM ESLLFGFLWA GWCLLSLSLI SGWLFLDNLF AQHLAHKTLL ACVAWVVFSV LLWGRTRLGW RGHMAIRWTL SGFCLLMLAY FGSKLVREFI LHI
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