Gene PP_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1460 
Symbol 
ID1045782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1665873 
End bp1666724 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content64% 
IMG OID637144861 
Productcytochrome c assembly protein 
Protein accessionNP_743618 
Protein GI26988193 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.164878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACT CCGTCTCTTT AAAGGCTCGC CAACCAGGAC TTATGTTCTC CTCACCCAGC 
CTCATCCCCA ACCTGATCGC AGCCGGCCTA TATATAGCGG CGGCCATCTA CCAGGGCTCA
TACCTGTCCC AGGGCCGCAA GGCCGAAAAG CGCCTGCTTG GCCTGCTGGG TGCCATCGCG
GTCCTGGCCC AGGCCGGTGC ACTGTTCTTC CAGCTGATCA CCCCGCTGGG CCTGAGCCTG
GACTTCTTCA GCGCCGCCAG CCTGATCGCC GTGGCGGTCA TCTCCCTGAC CCTGCTGGCC
TGCCTGCGCA TACCCGTGGA AAACCTGCTG GTGCTGCTGT TCCCGCTGGG TGCGGTGACC
GCGCTGCTGG CCCAGTTCGC CCCCCCCGGC ACGGTACCGC TGATCAACGA AGAACCCGGC
ATCCTTGCGC ACATCCTGTT GTCGATCCTG GCCTACGGGC TGTTCACCAT CGCGGTGTTC
CAGTCGCTGC TGTTGCTGCT GCAGGACCGC CAGCTGAAGA ACAAGCACCC GTCCGGGCTG
ATCCGCAACT TCCCGCCACT GCAAACCATG GAAAGCCTGC TGTTCGGCTT CCTCTGGGCC
GGCTGGTGCC TGCTGTCGCT GTCGCTGATC TCCGGCTGGC TGTTCCTCGA CAACCTGTTC
GCCCAGCACC TGGCGCACAA GACCTTGCTG GCCTGTGTCG CCTGGGTGGT GTTCAGCGTG
CTGCTGTGGG GCCGCACCCG CCTGGGTTGG CGGGGCCACA TGGCCATCCG CTGGACGCTG
AGCGGTTTCT GCCTGCTGAT GCTGGCCTAT TTCGGCAGCA AGCTGGTTCG CGAATTCATC
TTGCATATCT GA
 
Protein sequence
MPNSVSLKAR QPGLMFSSPS LIPNLIAAGL YIAAAIYQGS YLSQGRKAEK RLLGLLGAIA 
VLAQAGALFF QLITPLGLSL DFFSAASLIA VAVISLTLLA CLRIPVENLL VLLFPLGAVT
ALLAQFAPPG TVPLINEEPG ILAHILLSIL AYGLFTIAVF QSLLLLLQDR QLKNKHPSGL
IRNFPPLQTM ESLLFGFLWA GWCLLSLSLI SGWLFLDNLF AQHLAHKTLL ACVAWVVFSV
LLWGRTRLGW RGHMAIRWTL SGFCLLMLAY FGSKLVREFI LHI