Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1459 |
Symbol | |
ID | 1045786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1664658 |
End bp | 1665863 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144860 |
Product | CBS domain-containing protein |
Protein accession | NP_743617 |
Protein GI | 26988192 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.194165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.166405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCC TGCCGTACGC ACCGCTATTC GGCACTCTGG CACTGGCCCT TTTGTGGTCA GCACTGTTCA CTGCCGTGGA GGCTGCCCGC CTGCAGCTCA ATGGCACACT GCGCGCCGGC GAAGACGGCC ATCCCGTGCT GCCAGCCCAG GCCTTGGTGC TGTGCGCCAG CCTGGGCAAG CTGCTGGTGC TGGGGCTGGC CTGCCTGGTG GGCCAGCGCC AGAGTGGCGA GCACGGCTTC TGGCTGGCAG GCCTGGCCGC GACCCTCACC TTGCTGGTGT TTGCCGAGTA TCTGCCGCGG CGCCTGGCCC GGCGTAACCC GCAGGCGTTC GTGAGCCTTG GTGCCAGCCT GCTGAAAGTG CCTCTCGCAC TGCTGCAGCC ACTGGCCTGC CTGCTGGACG GCGCCGCCAA GCTGATTCTG CGCCCGTTCC GGGCACAGCC CACAGCGGTG GCCCTGCACA CGCAGGAGGC CGACGACTTC GATGAGGATG AACAGCACGA AGCGCCTCGC CAGGGTCTGC TCGACGGCCT GCAGTCGCTG GACAAGATCA CCGTCAACGA CATCCTGGTG CCGCGCAACG AAGTGGATGG CATCAACCTC GACGAGCCGA TCGAACGCAT CGTCGAGCAG CTGATCGTCA GCCGCCACAC CCGCCTGCCG GTCTACCACA ACGACATCAA CCAGGTCGAA GCGATCCTCA ACACCAAGCT GATCAGCCAC CTGCTGCCCA AGGCCGAGCT GACCCTGGAA GCGCTGCACA GCGCCTGCTA CGAACCTTAT TTCGTACCAG AAAGCACGCC CCTGCAAATG CAGTTGTTGA ACTTCCACAA GCAGCAACGC CGCTTGGGCG TGGTGGTGGA CGAGTACGGC GAAGTACTGG GTATCGTCAC CCTGGAAGAC ATTCTCGAAG AGATCGTCGG CGAGTTCGAG GACGAGCAAA GCCTGGAAAA CCCGCATGTG CACCCGCAAC CCGACGGTAC CTTCGTCATC GATGGCACCG CTTCGTTACG CGAAATCAAC CGCACCCTGA GCTGGCACCT GCCCTGCGAC GGCGGGCCGA AAACCCTCAA CGGGCTGGTT ACCGAAGCGC TGGAAAGCAT CCCGGAAAGC GCTGTTTGCC TGAAAATAGG CCGCTATCGC CTGGAAATCC TTGAAACAGA GGACAATTGC GCCAGCAAGG TACTGGTGTG GACCGTGACC CGATAG
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Protein sequence | MDTLPYAPLF GTLALALLWS ALFTAVEAAR LQLNGTLRAG EDGHPVLPAQ ALVLCASLGK LLVLGLACLV GQRQSGEHGF WLAGLAATLT LLVFAEYLPR RLARRNPQAF VSLGASLLKV PLALLQPLAC LLDGAAKLIL RPFRAQPTAV ALHTQEADDF DEDEQHEAPR QGLLDGLQSL DKITVNDILV PRNEVDGINL DEPIERIVEQ LIVSRHTRLP VYHNDINQVE AILNTKLISH LLPKAELTLE ALHSACYEPY FVPESTPLQM QLLNFHKQQR RLGVVVDEYG EVLGIVTLED ILEEIVGEFE DEQSLENPHV HPQPDGTFVI DGTASLREIN RTLSWHLPCD GGPKTLNGLV TEALESIPES AVCLKIGRYR LEILETEDNC ASKVLVWTVT R
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