Gene PP_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1445 
SymboloprB-2 
ID1045819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1647383 
End bp1648717 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content62% 
IMG OID637144846 
Productporin B 
Protein accessionNP_743603 
Protein GI26988178 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3659] Carbohydrate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.374886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAAC TGCCTAAAAC CTGCTACATC GGCCTGGCCC TCAGTGCCTT GGCAACCCCC 
GCCGGCGCCA GCGAAATGTT CGCCAGCGAC TCCCCTTGGA TGCTCGGCGA CTGGGGTGGA
ACCCGCAGCG AACTGCTGGA AAAGGGCTAC GACTTCACCC TTGGCTACAC CGGCGAGATG
GGCAGCAACC TGCACGGCGG CTACGACCAC GACCGCACCG CGCGCTACAG CGACCAGTTC
ACCTTCGGCA GCCACCTGGA CCTGGAGAAG ATCCTCGGCT GGCACGACAC CGAATTCCAG
CTGACCGTCA CCGAGCGCCA CGGCGACAAC ATCAGCAACG ACCGCATCAA CGACCCGCGT
GTCGGCGGCT TCACCTCCGC CCAGGAAGTC TGGGGCCGCG GCGAAACCTG GCGACTGACG
CAGATGTGGA TCAAGCAGAA GTACTTCGAC GGTGCGCTGG ATGTGAAATT CGGCCGCTTT
GGTGAAGGCG AGGACTTCAA CAGCTTCCCT TGCGACTTCC AGAACCTGGC TTTCTGCGGC
TCGCAGGTGG GCAACTGGGT GGGTGGCATC TGGTACAACT GGCCAGTCAG CCAGTGGGCC
CTGCGCGTGC GCTACAACCT TACCCCCGAG CTGTACGCCC AGGTCGGCGT CTTCGAGCAG
AACCCTTCCA ACCTCGAATC CGGCAATGGT TTCAAGCTCA GCGGCAGCGG CACCCAGGGT
GCGGTAATGC CGTTCGAACT GGTATGGACC CCACGTATCC AAGGCTTGAA AGGGGAATAT
CGTGCCGGCT ACTACTACAG TAATGCCAAG GCACAAGATG TTCTCAAGGA CAGCAACGGT
CAGCCGGCCG CCCTCAGCGG CGCCGCCTAC CGCAGCAGTT CGAGCAAGCA CGGCTTGTGG
ATTGGCGCCC AGCAGCAGGT CACCTCGCTG GCGTCCGACC AGTCGCGCGG CTTGAGCGTG
TTCGCCAACG CCACGGTGCA TGACAAAAAG ACCAATGCCA TCGACAACTA TGTGCAGGCA
GGACTGGTAT TCAAAGGGCC TTTCGATGCC CGCGCCAAGG ACGACATCGG TTTCGCCCTG
GCCCGCGTGC ACGTCAACCC TGCCTATCGC AAGAACGCCC GCCTGGTCAA CCAGGCCGCC
GGCCTCTATG ACTACGACAA CCCGGGCTTC CTGCCAGTGC AGGACACCGA GTACAGCGCC
GAGCTGTATT ACGGCATTCA CTTGGCCGAC TGGCTCACGG TACGCCCCAA CCTGCAGTAC
ATCCGCCACC CGGGCGGGGT GTCGCAGGTC GATGGCGCCC TGATCGGCGG CCTGAAGATC
CAGAGCAGTT TCTAA
 
Protein sequence
MFQLPKTCYI GLALSALATP AGASEMFASD SPWMLGDWGG TRSELLEKGY DFTLGYTGEM 
GSNLHGGYDH DRTARYSDQF TFGSHLDLEK ILGWHDTEFQ LTVTERHGDN ISNDRINDPR
VGGFTSAQEV WGRGETWRLT QMWIKQKYFD GALDVKFGRF GEGEDFNSFP CDFQNLAFCG
SQVGNWVGGI WYNWPVSQWA LRVRYNLTPE LYAQVGVFEQ NPSNLESGNG FKLSGSGTQG
AVMPFELVWT PRIQGLKGEY RAGYYYSNAK AQDVLKDSNG QPAALSGAAY RSSSSKHGLW
IGAQQQVTSL ASDQSRGLSV FANATVHDKK TNAIDNYVQA GLVFKGPFDA RAKDDIGFAL
ARVHVNPAYR KNARLVNQAA GLYDYDNPGF LPVQDTEYSA ELYYGIHLAD WLTVRPNLQY
IRHPGGVSQV DGALIGGLKI QSSF