Gene PP_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1444 
Symbolgcd 
ID1045820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1644941 
End bp1647352 
Gene Length2412 bp 
Protein Length803 aa 
Translation table11 
GC content65% 
IMG OID637144845 
Productglucose dehydrogenase (pyrroloquinoline-quinone) 
Protein accessionNP_743602 
Protein GI26988177 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4993] Glucose dehydrogenase 
TIGRFAM ID[TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.244266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG AAGGTGCGAA CCAAGGAAGC CGCTGGCTAC CGCGCCTGAT TGGCGCGCTG 
CTGTTGCTGA TGGGCCTGGC CCTGCTGGCC GGCGGTATCA AGCTGAGCCA GCTGGGCGGA
TCGCTGTACT ACCTGATCGC CGGTATTGGC TTTGCCCTTT CGGGCGTCCT GCTGCTGGCC
CAACGCCAGA TCGCCCTGGG CCTGTATGGC CTGGTGCTGC TGGGCAGCAC CGTGTGGGCC
CTGTTCGAAG TAGGCCTGGA CTGGTGGCAA CTGGTGCCAC GGCTGGCTAT CTGGTTCGCC
ATCGGCGTGG TGTTGCTGCT GCCGTGGGCA CGTCGCCCGC TGATCGGCCC AGCCAGCAAA
GCCAACACTG CACTGCTCGG CGTGGCAGTG GTCGCTTCGG GCGCTTGCGC GCTGGCCAGC
CAGTTCACCC ATCCCGGTGA AGTGTTCGGC GAACTGGGCC GCGACAGCAG CGAAATGGCC
AGCGCCGCCC CGGCCATGCC CGACGGCGAA TGGCAGGCCT ACGGCCGTAC CGAGCATGGC
GACCGCTACT CGCCGCTGCG CCAGATCACC CCGCAGAACG CCTACCGTCT GGAAGAAGCC
TGGCGCATTC GCACCGGTGA TCTGCCAACC GAAAACGACC CGGTGGAGCT GACCAACCAG
AACACCCCGC TGAAGGTCAA CGGCATGCTT TACGCCTGCA CCGCGCACAG TCGCCTGCTG
GCGCTGGACC CGGACACTGG CGCAGAAATC TGGCGCTACG ACCCGCAGGT CAAGAGCCCG
ACCGGCACCT TCAAGGGCTT TGCCCACATG ACCTGCCGTG GCGTCTCGTA CTATGACGAA
AACCGCTACG TCAGCCGCGA CGGCAGCCCG GCGCCGAAAA TTACCGATGC AGGCCAGGCC
GTGGCCCAAG CCTGCCCGCG TCGCCTCTAT CTGCCTACCG CGGATGCCCG CCTGATCGCC
ATCAACGCCG ACAACGGCAA GGTCTGCGAA GGCTTCGCCA ACCAGGGCGT GATCGACCTC
ACCACCGGCA TTGGCCCATT CACCGCCGGC GGCTATTACT CCACCTCGCC TGCTGCGATT
ACCCGTGACC TGGTGATCAT CGGTGGCCAC GTCACCGACA ACGAGTCGAC CAATGAGCCG
TCCGGGGTGA TCCGCGCCTA CGACGTGCAC GACGGCCACC TGGTGTGGAA CTGGGACAGT
AACAACCCGG ACGACACCAA GCCATTGGCT GCCGGCAAAA TGTACAGCCG CAACTCGGCC
AACATGTGGT CGATCGCCAG CGTCGACGAA GACCTTGGCA TGATCTACCT GCCGCTGGGC
AACCAGACCC CGGACCAGTG GGGCGCCGAC CGCACCCCGG GCGCCGAGAA GTACAGCGCC
GGCGTGGTCG CCCTTGACCT GGCCACCGGC AAGGCACGCT GGAACTATCA GTTCACCCAC
CACGACCTGT GGGACATGGA CGTCGGCAGC CAGCCGACCC TGGTACACCT GAAAACCGAC
GATGGTGTGA AACCGGCGAT CATCGTACCG ACCAAGCAAG GCAGCCTGTA CGTGCTCGAC
CGCCGCGACG GTACGCCAAT CGTGCCGATC CGCGAGATCC CCACCCCACA AGGCGCAGTG
GAAGGCGACC ACACCTCGCC CACCCAGGCC CGCTCCGACC TCAACCTGCT CGGCCCAGAG
CTGACCGAAC AGGCCATGTG GGGCGCCACG CCTTTCGACC AGATGCTGTG CCGCATCCAG
TTCCGCGAAC TGCGCTACGA AGGCCAGTAC ACCCCGCCAT CCGAACAAGG TTCGTTGGTC
TACCCCGGCA ACGTCGGTGT ATTCAACTGG GGCAGCGTGT CGGTCGACCC GGTGCGCCAG
CTGCTGTTCA CTTCGCCCAA CTACATGGCG TTCGTGTCGA AGATGGTCCC GCGTGAGCAG
GTTGCCGAAG GCAGCAAGCG CGAAAGCGAG ACCAGCGGCG TGCAGCCGAA CACCGGCGCA
CCGTATGCAG TGATCATGCA CCCGTTCATG TCGCCGCTCG GTGTACCGTG CCAGGCACCC
GCCTGGGGCT ACGTCGCCGC CATCGACCTG TTCACCAACA AGGTGGTGTG GAAACACAAG
AACGGCACCA CCCGCGACAG CACCCCGCTA CCGATCGGCC TGCCGGTTGG CGTGCCGAGC
ATGGGTGGCT CGATCGTCAC CGCCGGTGGC GTCGGCTTCC TCAGCGGCAC GCTCGACCAG
TACCTGCGCG CCTATGACGT GAACAACGGC AAGGAGTTGT GGAAAGCACG CCTGCCAGCG
GGTGGCCAGG CTACGCCGAT GAGCTACACC GGCAAGGACG GCAAGCAGTA CGTGCTGGTG
ACTGCCGGCG GCCATGGCTC GCTGGGCACC AAGATGGGCG ATTACATCAT TGCTTACAAA
TTAGCCGAGT AA
 
Protein sequence
MSTEGANQGS RWLPRLIGAL LLLMGLALLA GGIKLSQLGG SLYYLIAGIG FALSGVLLLA 
QRQIALGLYG LVLLGSTVWA LFEVGLDWWQ LVPRLAIWFA IGVVLLLPWA RRPLIGPASK
ANTALLGVAV VASGACALAS QFTHPGEVFG ELGRDSSEMA SAAPAMPDGE WQAYGRTEHG
DRYSPLRQIT PQNAYRLEEA WRIRTGDLPT ENDPVELTNQ NTPLKVNGML YACTAHSRLL
ALDPDTGAEI WRYDPQVKSP TGTFKGFAHM TCRGVSYYDE NRYVSRDGSP APKITDAGQA
VAQACPRRLY LPTADARLIA INADNGKVCE GFANQGVIDL TTGIGPFTAG GYYSTSPAAI
TRDLVIIGGH VTDNESTNEP SGVIRAYDVH DGHLVWNWDS NNPDDTKPLA AGKMYSRNSA
NMWSIASVDE DLGMIYLPLG NQTPDQWGAD RTPGAEKYSA GVVALDLATG KARWNYQFTH
HDLWDMDVGS QPTLVHLKTD DGVKPAIIVP TKQGSLYVLD RRDGTPIVPI REIPTPQGAV
EGDHTSPTQA RSDLNLLGPE LTEQAMWGAT PFDQMLCRIQ FRELRYEGQY TPPSEQGSLV
YPGNVGVFNW GSVSVDPVRQ LLFTSPNYMA FVSKMVPREQ VAEGSKRESE TSGVQPNTGA
PYAVIMHPFM SPLGVPCQAP AWGYVAAIDL FTNKVVWKHK NGTTRDSTPL PIGLPVGVPS
MGGSIVTAGG VGFLSGTLDQ YLRAYDVNNG KELWKARLPA GGQATPMSYT GKDGKQYVLV
TAGGHGSLGT KMGDYIIAYK LAE