Gene PP_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1430 
SymbolalgY 
ID1045851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1629584 
End bp1631062 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content62% 
IMG OID637144831 
Productprotease Do 
Protein accessionNP_743588 
Protein GI26988163 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGGGT CTTTCCAAAC TACCGCTCGT TGTGACGGGA GTCGTATGTC AATACCACGC 
TTGAAATCCT ACCTAATGAT GTTCGCTGCT GTGCTGATGC TCGGCCAAGT AGTCGCCGCC
CAGGCCGAGG AAGCCCTGCC GGACTTCACC ACCCTGGTGG AGCAGGCTTC GCCGGCGGTG
GTCAACATCA GTACCAAGCA GAAGCTGCCT GACCGCCGGA TCGCCGCAAA CCAGATGCCG
GATCTGGAAG GCCTGCCGCC GATGTTCCGC GAGTTCTTCG AGCGCAACAT GCCCCAGCAG
CCCCGTTCGC CGCGCGGCGA CCGCCAGCGC GAGGCGCAGT CGCTGGGCTC GGGCTTCATC
ATTTCCAGTG ATGGCTACGT GCTCACCAAT AACCATGTGG TGGCCGATGC CGACGAGATC
ATCGTCCGCC TGTCGGACCG TAGCGAGCTC CAGGCCAAGC TGGTCGGCAC CGACCCGCGC
ACTGACGTGG CGCTGCTGAA GGTCGATGGC AAGAATTTGC CAACGGTGAA ACTGGGTGAC
TCCGAGAAGC TCAAGGTGGG CGAGTGGGTA CTGGCCATCG GTTCGCCGTT CGGCTTCGAC
CATTCGGTGA CCAAAGGTAT CGTCAGCGCC AAGGGCCGGA CCCTGCCCAA TGACACCTAC
GTACCGTTCA TCCAGACCGA CGTGGCCATC AACCCGGGTA ACTCCGGCGG CCCGCTGTTC
AACATGAAAG GCGAAGTGGT GGGGATCAAC TCGCAGATCT TCACCCGTTC TGGCGGTTTC
ATGGGCCTGT CGTTCGCCAT CCCGATTGAT GTGGCGATCG ATGTCTCCAA CCAGCTGAAG
AAAGACGGCA AGGTCAGCCG CGGCTGGCTG GGCGTGGTGA TTCAGGAGGT CAACAAGGAC
CTGGCTGAAT CGTTCGGCCT GGACAAGCCG GCGGGCGCCC TGGTGGCCCA GGTGCTGGAA
AACGGCCCGG CAGCCAAAGG CGGCCTGCAG GTGGGCGACG TGATCCTCAG CATGAACGGC
CAGCCAATCG TCATGTCGGC CGATCTGCCG CACCTGGTAG GCGGCCTCAA GGATGGCGAG
AAGGCCAAGC TGGAAATCAT CCGCAATGGC AAGCGCCAGA ACCTGGACAT CAGCGTCGGC
GCGCTGCCGG ATGACGACGT TGACATTGGC GCTGGCACCG AAGGCAGCGC CGAGCGCAGC
AGCAACCGCC TGGGTGTATC GGTCGCCGAC CTGACCGCCG AGCAGAAAAA ATCCCTGGAG
CTCAAAGGTG GCGTGGTCAT CAAGGAAGTG CAGGATGGCC CGGCAGCCAT GATCGGCTTG
CGCCCTGGTG ATGTCATCAG CCATCTGAAC AACCAGGCCA TCGGTTCGGC CAAGGAATTC
ACCGAAATCG CCAAGGAACT GCCGAAGAAT CGTTCCGTGT CGATGCGCGT ACTGCGTCAG
GGCCGTGCCA GCTTCATCAC TTTCAAGCTT GCTGAATAA
 
Protein sequence
MQGSFQTTAR CDGSRMSIPR LKSYLMMFAA VLMLGQVVAA QAEEALPDFT TLVEQASPAV 
VNISTKQKLP DRRIAANQMP DLEGLPPMFR EFFERNMPQQ PRSPRGDRQR EAQSLGSGFI
ISSDGYVLTN NHVVADADEI IVRLSDRSEL QAKLVGTDPR TDVALLKVDG KNLPTVKLGD
SEKLKVGEWV LAIGSPFGFD HSVTKGIVSA KGRTLPNDTY VPFIQTDVAI NPGNSGGPLF
NMKGEVVGIN SQIFTRSGGF MGLSFAIPID VAIDVSNQLK KDGKVSRGWL GVVIQEVNKD
LAESFGLDKP AGALVAQVLE NGPAAKGGLQ VGDVILSMNG QPIVMSADLP HLVGGLKDGE
KAKLEIIRNG KRQNLDISVG ALPDDDVDIG AGTEGSAERS SNRLGVSVAD LTAEQKKSLE
LKGGVVIKEV QDGPAAMIGL RPGDVISHLN NQAIGSAKEF TEIAKELPKN RSVSMRVLRQ
GRASFITFKL AE