| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1416 |
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| Symbol | |
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| ID | 1045917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1615740 |
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| End bp | 1617254 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144817 |
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| Product | tricarboxylate transport protein TctA, putative |
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| Protein accession | NP_743574 |
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| Protein GI | 26988149 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCT TGAGCTACCT GGGCCAGGGC TTCGGCATTG CCCTGTCCCC CTACAACCTG
GTCACCGCCC TCTCCGGCAC CTTGATCGGC ACCGTGGTCG GCCTGCTACC GGGCCTGGGC
CCGATCAACG GCGTGGCCCT GCTGATCCCC ATCGCCTTTG CCCTCGGCCT GCCGCCGGAA
TCGGCGCTGA TCCTGCTGGC CGCAGTGTAC CTGGGCTGCG AATATGGCGG GCGTATCAGC
TCGATCCTGC TGAACATCCC GGGCGAAGCC TCGACCGTCA TGACCACCCT CGATGGTTAC
CCGATGGCCC GCCAGGGCCT GGCCGGTGTT GCCCTGTCGC TGTCGGCCTG GAGTTCGTTC
ATCGGCGCCT TCATCGCCAC CTGCGGCATG GTGCTGTTCG CCCCGCTGCT GGCGAAATGG
GCCATCGCCT TCGGCCCGGC GGAGTACTTT GTGCTGATGG TGTTCGCCAT CGTCGCGTTG
GGTGGCATGG CCGGTGACAA ACCACTGAAA ACCTTCATTG CCGCTCTCAT CGGCCTGTTC
CTCTCGGCGG TCGGCATCGA CGCCAACAGC GGCGTGTACC GCTTCACCGG TGACAGCGTG
CACCTGGCCG ACGGCATTCA GTTCGTGGTC CTCGTGCTGG GCCTGTTCTC CATCAGCGAA
ATCCTCCTGC TGCTGGAAAA GACCCACCAT GGCCACCAGG CGGTCAAGGC TACCGGCCGT
ATGCTGTTCA ACTTCAAGGA AGCGGCCTCG GTGTTCCTGG TCAACATCCG TTGCGGCCTG
CTTGGTTTCA TCATGGGTGT TCTACCCGGC GCCGGCGCAA CGCTGGCCAG CGCCGTGGCC
TACATGACCG AGAAACGCAT GGCCGGGGAA AGCGGCAAGT TCGGCAAAGG CGATGCCCGT
GGCCTGGCAG CCCCGGAAAC TGCCATTGGT GCGTCCTGCT GTGGCGCCCT GGTCCCGATG
CTGACCCTGG GTGTCCCGGG CTCTGGCACC ACGGCCGTGA TGATCGGCGC CCTGACCCTG
TACAACATCA CCCCTGGCCC ACTGCTGTTC GAACAGCAGC CAGATATCGT CTGGGGCCTG
ATCGCCTCGC TGTTCGTCGC CAACATCATG TTGGTAATCC TCAACATCCC GATGATCCGC
ATCTTCACCC GCATCCTCGC CGTGCCAAAC TGGGCGCTGG TGCCGGTGAT CGCCATCATC
ACCGCGATCG GCGTTTACGC CGTGCATGCC ACTACCTTCG ACCTGTTCCT GATGGTCGGC
ATCGGCATCA TGGGCTACAT CATGCGCAAG CTGGACTTCC CACTGTCGCC GATTCTGCTG
GGCTTCATCC TCGGCGGGCT GATGGAGCAG AACCTGCGTC GGGCGCTGTC GATCTCCAAC
GGCGAACTGG GCATCCTCTG GTCGAGCCCG ATCAGCATGG GCATCTGGGC GCTGGTAGTG
GTAATGCTCG CCCTGCCGCT GCTGCGCATC TGGCGCAAAC GCAGCCTGCA GCGCCGGGCC
CTGGCCGATG CCTGA
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| Protein sequence | MDTLSYLGQG FGIALSPYNL VTALSGTLIG TVVGLLPGLG PINGVALLIP IAFALGLPPE
SALILLAAVY LGCEYGGRIS SILLNIPGEA STVMTTLDGY PMARQGLAGV ALSLSAWSSF
IGAFIATCGM VLFAPLLAKW AIAFGPAEYF VLMVFAIVAL GGMAGDKPLK TFIAALIGLF
LSAVGIDANS GVYRFTGDSV HLADGIQFVV LVLGLFSISE ILLLLEKTHH GHQAVKATGR
MLFNFKEAAS VFLVNIRCGL LGFIMGVLPG AGATLASAVA YMTEKRMAGE SGKFGKGDAR
GLAAPETAIG ASCCGALVPM LTLGVPGSGT TAVMIGALTL YNITPGPLLF EQQPDIVWGL
IASLFVANIM LVILNIPMIR IFTRILAVPN WALVPVIAII TAIGVYAVHA TTFDLFLMVG
IGIMGYIMRK LDFPLSPILL GFILGGLMEQ NLRRALSISN GELGILWSSP ISMGIWALVV
VMLALPLLRI WRKRSLQRRA LADA
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