| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1415 |
|---|
| Symbol | |
|---|
| ID | 1045918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1614692 |
|---|
| End bp | 1615747 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637144816 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_743573 |
|---|
| Protein GI | 26988148 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3180] Putative ammonia monooxygenase |
|---|
| TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATC GGTCGTTGCC ATTGTTCGTC GCGACCGGGC TGGTCGGCCT TGCTGGCGGT
TTTGCCGCCA GCAAGGTCGG CTGGCCTTTG CCATGGATGG TCGGTTCATT GCTGGCGATC
ATCCTGGTGC GCTGCCTGAC GCGTTGGCAG CTTTCGGAAA TCCCCAACGG CCGCAAGTGC
GGGCAGTGGA TCATCGGCAT CGGTATTGGC CTGCACTTCA CCCCCGCGGT GATCGAGCAG
GTGGCCAGCC ATTTCGCGCT GATTTTCTTC GGTGCGTTGT TCACCACCCT GTCCAGCGTG
ATCAGCGTAT GGCTGCTGCG GCGAACCGGC GAAGACCGCG CCACCGCGTT CTTTGCCAGC
ATGCCAGGCG GTTCGGGAGA GATGGTCAAC CTTGGGGCGC GCAATGGCGC GGTGCTCAGC
CAGGTGGCGG CAGCGCAGAG CTTGCGTGTG CTGGCAGTGG TGCTTTGCGT GCCGGCGCTG
TTCAAGTTTC TGCTGGGTGA CGGGGTACCA CTGAACCACA CCGGTAGCGT GAGCTGGGGC
TGGCTGGCAT TGATTGCGCC CTTGGGTGTT GCCGTTGCCT TGCTCTGGCA GCGCTTGCGC
CAGCCCAACC CCTGGCTGTT CGGGCCATTG CTGGTAGCGG CTACGGTCAG CCTGGCCGGC
AACCTGCAGA TCGCCCTGCC CAATGGCGCC AGCCAGATCG GCCAGTGGCT CATCGGCAGC
GGCCTGGCCT GTCACTTCAA CCGCGCGTTC TTCCGCCGCG CACCGTCGTT CCTGGGGCGC
ACCTTGATGG CCACGGCGTT GTGCATGGCG ATTGCCGCCA GTGCCGCGTG GCTGCTGAGC
ATGATGACTG CACTGGACTT GCGTTCGCTG ACACTGGGGA TGATGCCTGG CGGGATCGCC
GAAATGAGCC TCACGGCCGA AACGCTGCAA TTGTCAGTGC CGCTGGTGAC GGCGCTGCAG
GTGATGCGCC TGATCCTGGT GTTGTTTCTT GCAGAACCGC TCTTCCGGTT GTGGGACAAC
AGGCATTCGA GCTGCAAGTA CCCTGAAGAT AGATAG
|
|---|
| Protein sequence | MPDRSLPLFV ATGLVGLAGG FAASKVGWPL PWMVGSLLAI ILVRCLTRWQ LSEIPNGRKC
GQWIIGIGIG LHFTPAVIEQ VASHFALIFF GALFTTLSSV ISVWLLRRTG EDRATAFFAS
MPGGSGEMVN LGARNGAVLS QVAAAQSLRV LAVVLCVPAL FKFLLGDGVP LNHTGSVSWG
WLALIAPLGV AVALLWQRLR QPNPWLFGPL LVAATVSLAG NLQIALPNGA SQIGQWLIGS
GLACHFNRAF FRRAPSFLGR TLMATALCMA IAASAAWLLS MMTALDLRSL TLGMMPGGIA
EMSLTAETLQ LSVPLVTALQ VMRLILVLFL AEPLFRLWDN RHSSCKYPED R
|
|---|
| |