Gene PP_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1413 
Symbolung 
ID1046099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1612200 
End bp1612892 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content61% 
IMG OID637144814 
Producturacil-DNA glycosylase 
Protein accessionNP_743571 
Protein GI26988146 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG ACGATCGCAT CAAACTCGAA CCCAGCTGGA AGGCCGCATT GCGCGGTGAA 
TTCGACCAGC CTTACATGCA CCAGCTGCGC GAGTTCCTGC GTGGCGAGTA CGCTGCCGGC
AAGGAGATCT ACCCGCCAGG GCCGCTGATC TTCAATGCGC TCAATTCGAC ACCGCTGGAC
CAGGTGAAGG TGGTCATCCT CGGTCAGGAC CCGTACCACG GGCCGGGCCA GGCACATGGC
TTGTGCTTCT CGGTGCAACC GGGCGTGGCC ACGCCACCGT CGCTGGTCAA TATCTACAAG
GAGCTGCAGC GCGACCTGAA CATCCCGATC CCCAGCCACG GCTACCTCCA GAGCTGGGCG
GAACAAGGCG TTCTGTTGCT CAACACGACC ATGACCGTCG AGCGCGCCAA TGCCGCGTCG
CATGCCAAGA AAGGCTGGGA ATTGTTTACC GACAGGATTA TCCAGGTGGT CAGTGAGCAA
TGCCCGAACG TGGTGTTCCT GCTATGGGGG GCGCATGCAC AGAGCAAGCA GAAGCTGATC
GACGGTACCA AGCATCTGGT TTTGAAGTCG GTCCATCCTT CGCCGCTGTC GGCGTATCGC
GGGTTCATCG GTTGCGGGCA TTTCAGCCGT GCCAACAGCT TCCTCGAGCA GCGGGGGCTC
GGGCCCATCG ACTGGGCACT GCCCCCGCTG TGA
 
Protein sequence
MTDDDRIKLE PSWKAALRGE FDQPYMHQLR EFLRGEYAAG KEIYPPGPLI FNALNSTPLD 
QVKVVILGQD PYHGPGQAHG LCFSVQPGVA TPPSLVNIYK ELQRDLNIPI PSHGYLQSWA
EQGVLLLNTT MTVERANAAS HAKKGWELFT DRIIQVVSEQ CPNVVFLLWG AHAQSKQKLI
DGTKHLVLKS VHPSPLSAYR GFIGCGHFSR ANSFLEQRGL GPIDWALPPL