Gene PP_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1404 
Symbol 
ID1041587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1601366 
End bp1601983 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID637144805 
Producthypothetical protein 
Protein accessionNP_743563 
Protein GI26988138 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCT TCGACGAATA CCATCAGCGG CAGATTGCCG AAGCCATTGC CCGTGCCGAA 
CGGCATACCG ATGCCGAACT GGTGACGGTG CTTGCCCGTC GTGCCGACGA TTATGCGTAT
TGGCCGTTGT TGTGTGCCGC CGTGCTGGCA CTGACCGTGC CCGGTCTGTT GCACTGGCTG
GCGGCTTGGC CCAGCGTGCG TGGCGTGCTG ATGGGCAACG TGCTGCTGTT CGTCGTTTTG
TGCCTGCTGC TGCGCAACCC ACGCCTGGCC GACTGGCTGA TCCCCCGTGC CTTGCGCCGC
TGGCGTGCCT CGCGCCTGGC TCAGCAGCAG TTTCGCGAGC AGAATCTGCA GCGCACAGCA
GGCGCCACGG GCGTGCTGAT TTTCGTCAGC GAGGCGGAGC GGCATGTGGA GATCCTGGTC
GATCGGGGTA TCGAGCACTG CCTGGATGCC GAAGCCCGTG CGGCCATCGG TGCCCGCTTG
GCCGAGCAGG TGCGCCAGGG CCGTACCTTG CAGGGCTTTG TCGAGTGCAT CGAAGCGTGT
GGCGAGCTGC TTAGCCAGCA CGTGCCGCCA ACCCATGCAC GCAACGAGTT GCCCAACCGC
TTGGTGATTC TCGACTGA
 
Protein sequence
MTPFDEYHQR QIAEAIARAE RHTDAELVTV LARRADDYAY WPLLCAAVLA LTVPGLLHWL 
AAWPSVRGVL MGNVLLFVVL CLLLRNPRLA DWLIPRALRR WRASRLAQQQ FREQNLQRTA
GATGVLIFVS EAERHVEILV DRGIEHCLDA EARAAIGARL AEQVRQGRTL QGFVECIEAC
GELLSQHVPP THARNELPNR LVILD