| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1398 |
|---|
| Symbol | |
|---|
| ID | 1043914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1592669 |
|---|
| End bp | 1593274 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637144799 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_743557 |
|---|
| Protein GI | 26988132 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.709674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTACT ACGAACCCGC CAAAGGCCAC GGCCTGCCGC ACGACCCGTT CAATGCCATC
GTCGGTCCCC GCCCGATCGG CTGGATCTCC TCTCAGGACC GCGAAGGCCG CCTGAATCTG
GCGCCTTACA GCTTCTTCAA TGCGTTCAAC TACATCCCGC CGATCATCGG TTTCTGCAGC
GTCGGGCGCA AAGACAGCCT GAACAACATC GAGCAGACCG GTGAGTTCGT CTGGAACCTG
GCCACCCGCC CACTGGCCGA GCAAATGAAC CTGAGCTGCG CACCGGTCGC TGCCGAAGTG
AACGAATTCG AATTGAGCGG CCTCACTGCC GCACCGTCTA GCATCGTCAA GGTGCCGCGC
GTGGGTGAAA CGCCGGTAGC CTTCGAGTGC AAGGTCAGCC AGATCGTCCA GCTCAAGCGG
GCCGACCAGG AACAGGTGCC CAGCTGGCTG ATCCTTGGAG AAGTGGTGGC GGTGCACATT
GCCGAGCACC TGTTGAACAA CGGCATCTAC GATACCGCTG CCGCCGAGCC GATCCTGCGT
GGGGGTGGCC CGGCGGATTA TTTCGAGCTG GGCAACCTGT TCAAGATGGC CCGGCCGCCG
GCCTGA
|
|---|
| Protein sequence | MYYYEPAKGH GLPHDPFNAI VGPRPIGWIS SQDREGRLNL APYSFFNAFN YIPPIIGFCS
VGRKDSLNNI EQTGEFVWNL ATRPLAEQMN LSCAPVAAEV NEFELSGLTA APSSIVKVPR
VGETPVAFEC KVSQIVQLKR ADQEQVPSWL ILGEVVAVHI AEHLLNNGIY DTAAAEPILR
GGGPADYFEL GNLFKMARPP A
|
|---|
| |