Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1395 |
Symbol | |
ID | 1041904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1590969 |
End bp | 1591889 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144796 |
Product | AraC family transcriptional regulator |
Protein accession | NP_743554 |
Protein GI | 26988129 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCG CCACGTCCAC CGAACCGACC CTGGAACTGC AGCGCCTGGA GCTGGCCGAG CTGATCAACC GCCATGCGGG CGAGCCCTTT GGTCCAGCAT CGGCCATCGA TGACCTGTAC CTGGTGCGTT ACACCGAAAA TGTACGTTCT GTACCCACCC TGGCGCAGCC TGCCCTGTGC ATCCTTGCCC AGGGCAGCAA AAGCCTGTTC CTGGGTGACG AGCAGTACGC CTACGACCCA CTGCATTACA TGGTCGTTTC GGTGACCTTG CCACTCAGCG CCGTGAGGCT GGATGCCAGC CCCGAGAACC CAAGCCTGGG CCTGCGCATG GACCTGGACC CGGCGGAGAT CAGCCAACTG ATCGCCGAGA GCGGGCCAAT GCTGGTACCC AATCGACCTT CCGGCCGTGG TTTGTATGTG GAAAGGACAG ATGCCGCGTT ACTCGATGCC CTGCTGCGGT TGCTGCGGCT GCTGGACACC CCTCGCGACA TCGCAATGCT GGCGCCGCTG TTCCGCCGCG AGATTCTCTA CCGCCTGCTG CGTGGGCCGC AGGGTTACCG GCTGTATGAA ATTGCCTTGG CCAACAGCCA GACCCACCGG GTTTGCCAGG CCATCACTTG GCTCAACAAC AACTTCCAAC AACCGCTGCG TATCGAGGAC CTGGCCCGTG AGGTCAACCT CAGCACCTCG ACCTTGCACC ACCGCTTCAA GGCCGTGACC TCGATGAGCC CGCTTCAGTA CCAGAAGCAG CTGCGCCTGC AGGAGGCGCG GCGGCTGATG TTGAACGACG GGCTGGAGGC GGCGGTGGCG GCTTATCGGG TGGGTTATGA AAGCCCGTCG CAGTTCAGCC GTGAATACAG CCGGCTTTAC GGCGCGCCGC CGATTCGCGA TGTGGCTCGG TTGCGGGCTA CTGCGGTCTG A
|
Protein sequence | MTTATSTEPT LELQRLELAE LINRHAGEPF GPASAIDDLY LVRYTENVRS VPTLAQPALC ILAQGSKSLF LGDEQYAYDP LHYMVVSVTL PLSAVRLDAS PENPSLGLRM DLDPAEISQL IAESGPMLVP NRPSGRGLYV ERTDAALLDA LLRLLRLLDT PRDIAMLAPL FRREILYRLL RGPQGYRLYE IALANSQTHR VCQAITWLNN NFQQPLRIED LAREVNLSTS TLHHRFKAVT SMSPLQYQKQ LRLQEARRLM LNDGLEAAVA AYRVGYESPS QFSREYSRLY GAPPIRDVAR LRATAV
|
| |