Gene PP_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1382 
Symbol 
ID1041960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1574486 
End bp1575010 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID637144783 
Producthypothetical protein 
Protein accessionNP_743541 
Protein GI26988116 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.423125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.571464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC TCGTCGACCA CCTGAGCCAA TACGCCAACT ACCACCGCGA TCCACGCAAC 
ATCGCCACCC ACTTCGTCGG CATCCCCATG ATCGTGCTGG CAGTCACCAT CCTGCTTTCA
CGCCCAGGCT GGGAGATAGC TGGCATGTGG CTGTCCCCTG CCCTGCTGGC AGCGGCGGCA
TCTGTGTGGT TCTACTTGCG CCTGGACCTG CGCTTCGGGC TGGTGATGGG GCTGTTGCTG
GGCCTGTGCC TGTGGGTCGG TGAGGCGCTG GCAGTGCAGT CGACAACGCT ATGGCTCGGC
GCCGGGCTGG GGGCGTTCGT GGTGGGCTGG ATCATCCAGT TCATCGGCCA TTACTACGAA
GGCCGCAAAC CGGCATTTGT CGACGACGTG AGCGGCCTGA TCATCGGGCC ACTGTTCGTG
GTGGCGGAAG CTGCGTTCAT GCTGGGCCTG TGCCCGACCC TGAAGCGCGC CGTGGAAGCC
AACGCCGGCC CGATTGCCAT GCGGCAAAAA AAGGCATCGG TGTAA
 
Protein sequence
MKTLVDHLSQ YANYHRDPRN IATHFVGIPM IVLAVTILLS RPGWEIAGMW LSPALLAAAA 
SVWFYLRLDL RFGLVMGLLL GLCLWVGEAL AVQSTTLWLG AGLGAFVVGW IIQFIGHYYE
GRKPAFVDDV SGLIIGPLFV VAEAAFMLGL CPTLKRAVEA NAGPIAMRQK KASV