| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1381 |
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| Symbol | pcaC |
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| ID | 1043902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1574041 |
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| End bp | 1574433 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144782 |
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| Product | 4-carboxymuconolactone decarboxylase |
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| Protein accession | NP_743540 |
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| Protein GI | 26988115 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.760953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.559328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGAGA AACAACGTTA CGACGCTGGC ATGCAAGTGC GCCGCGCAGT GCTGGGTGAT
GCCCACGTGG ACCGCAGCCT GGAGAAGCTC AACGACTTCA ATGGCGAGTT CCAGGAAATG
ATCACCCGCC ACGCCTGGGG TGACATCTGG ACCCGCCCGG GGCTGCCGCG CCATACCCGC
AGCCTGATCA CCATCGCCAT GCTGATTGGC ATGAACCGCA ACGACGAGCT GAAGCTGCAC
CTGCGTGCGG CGGCCAACAA TGGCGTGACC CGCGACGAGA TCAAGGAAGT GCTGATGCAG
AGCGCGATCT ACTGCGGCAT TCCGGCGGCC AATGCCACGT TCCACCTGGC TGAGTCGGTG
TGGGATGAAC TTGGCGTAGA GTCTCGCCAG TAA
|
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| Protein sequence | MDEKQRYDAG MQVRRAVLGD AHVDRSLEKL NDFNGEFQEM ITRHAWGDIW TRPGLPRHTR
SLITIAMLIG MNRNDELKLH LRAAANNGVT RDEIKEVLMQ SAIYCGIPAA NATFHLAESV
WDELGVESRQ
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