| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1380 |
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| Symbol | pcaD |
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| ID | 1042540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1573239 |
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| End bp | 1574030 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144781 |
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| Product | 3-oxoadipate enol-lactonase |
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| Protein accession | NP_743539 |
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| Protein GI | 26988114 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.595814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCGCACT TGCAACTGGC CGATGGCGTT TTGAATTACC AGATCGATGG CCCGGATGAC
GCCCCGGTGC TGGTCCTGTC CAACTCGCTG GGTACCGACC TGGGCATGTG GGACACCCAG
ATTCCGCTCT GGAGTCAGCA CTTCCGGGTG CTGCGCTATG ACACCCGTGG TCACGGCGCA
TCGCTGGTCA CTGAAGGCCC TTACAGCATC GAACAGCTGG GCCGCGACGT GCTGGCCCTG
CTCGATGGCC TGGACATTCA AAAGGCTCAC TTCGTCGGCC TGTCGATGGG CGGCCTGATC
GGCCAGTGGC TGGGTATCCA TGCAGGTGAG CGCCTGCACA GCCTGACCCT GTGCAACACG
GCCGCCAAGA TCGCCAATGA CGAGGTGTGG AACACCCGTA TCGACACGGT ACTCAAAGGC
GGCCAGCAGG CCATGGTCGA CCTGCGCGAT GCCTCCATCG CCCGCTGGTT CACCCCGGGC
TTTGCCCAGG CGCAGGCGGA GCAGGCCCAG CGTATCTGCC AGATGCTGGC GCAAACCAGC
CCGCAAGGCT ACGCAGGCAA CTGTGCAGCG GTACGTGACG CTGATTATCG TGAGCAACTG
GGCCGCATCC AGGTGCCTGC GCTGATCGTT GCCGGTACCC AAGACGTGGT TACCACCCCT
GAGCATGGCC GCTTCATGCA GGCCGGTATC CAAGGTGCCG AGTACGTCGA CTTCCCGGCG
GCGCACCTGT CCAATGTCGA GATTGGCGAG GCCTTCAGCC GCCGCGTGCT CGATTTCCTG
CTGGCTCACT GA
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| Protein sequence | MAHLQLADGV LNYQIDGPDD APVLVLSNSL GTDLGMWDTQ IPLWSQHFRV LRYDTRGHGA
SLVTEGPYSI EQLGRDVLAL LDGLDIQKAH FVGLSMGGLI GQWLGIHAGE RLHSLTLCNT
AAKIANDEVW NTRIDTVLKG GQQAMVDLRD ASIARWFTPG FAQAQAEQAQ RICQMLAQTS
PQGYAGNCAA VRDADYREQL GRIQVPALIV AGTQDVVTTP EHGRFMQAGI QGAEYVDFPA
AHLSNVEIGE AFSRRVLDFL LAH
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