| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1378 |
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| Symbol | pcaT |
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| ID | 1043906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1570576 |
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| End bp | 1571865 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144779 |
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| Product | metabolite/H+ symporter, major facilitator superfamily (MFS) |
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| Protein accession | NP_743537 |
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| Protein GI | 26988112 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.520748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.419528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTCAA CCTATTACAC CGGCGAAGAA CGCAGCAAGC GCATCTTCGC TATTGTCGGT
GCCTCATCAG GCAACCTGGT GGAATGGTTC GACTTCTACG TCTACGCCTT CTGCGCGATC
TACTTCGCCC CGGCCTTCTT CCCCTCCGAC GACCCCACCG TGCAGCTGTT GAACACGGCG
GGTGTATTCG CCGCGGGCTT TTTGATGCGC CCCATTGGTG GCTGGATCTT CGGCCGCCTC
GCCGACCGCC ATGGTCGCAA GAATTCCCTG ATGATCTCGG TGCTGATGAT GTGCTTCGGC
TCCCTGATGA TCGCCTGCCT GCCCACCTAT GCCAGCATCG GCACCTGGGC CCCGGCGCTG
CTATTGCTGG CCCGCCTGAT CCAGGGGCTG TCGGTAGGGG GCGAATACGG CACCACGGCC
ACCTACATGA GTGAAGTAGC GCTGCGTGGG CAGCGCGGCT TCTTTGCTTC GTTCCAGTAC
GTCACCCTGA TCGGCGGCCA GTTGCTGGCA GTCCTGGTCG TGGTGATCCT GCAACAGCTG
CTGACTGAAG ATGAACTGCG GGCCTGGGGC TGGCGCATTC CCTTCGTGGT GGGCGCCATC
GCCGCCCTGA TCTCGCTGAT GCTGCGCCGT TCGCTGCACG AGACCAGTAG CGCCGAAGCC
CGCAATGACA AGGATGCAGG TTCGATCGGA GGTTTGTTCC GCAATCACGC AGCGGCGTTC
ATCACGGTAC TGGGCTACAC CGCGGGTGGC TCGCTGATTT TCTATACTTT CACCACCTAT
ATGCAGAAGT ACCTGGTCAA CACCGCGGGC ATGACCGCCA AGAACGCCAG CTACGTGATG
ACCGGGGCGT TGTTCCTGTT CATGGTGGTG CAGCCGTTCT TCGGCATGCT GTCCGACCGT
ATCGGCCGGC GCAATTCGAT GCTGCTGTTC GGCGGCCTCG GTACCCTGTG CACCGTGCCG
CTGCTGATGG CGCTGAAAAC CGTGACCAGC CCGATCATGG CCTTCGTGCT GATCAGCCTG
GCCCTGTGTA TCGTGAGTTT CTACACCTCG ATCAGCGGTC TGGTGAAGGC CGAGATGTTC
CCGCCGCAGG TGCGTGCACT GGGTGTTGGC CTGGCCTACG CGGTGGCCAA CGCAGCATTC
GGCGGTTCGG CCGAGTATGT GGCCCTGGGC CTGAAAACCC TGGGGATGGA AAACACTTTC
TATTGGTACG TGACGGCGAT GATGGCGATT GCCTTCCTGT TCAGCCTGCG CCTGCCGAAG
CAGGCGGCGT ACCTGCACCA TGATGATTAA
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| Protein sequence | MTSTYYTGEE RSKRIFAIVG ASSGNLVEWF DFYVYAFCAI YFAPAFFPSD DPTVQLLNTA
GVFAAGFLMR PIGGWIFGRL ADRHGRKNSL MISVLMMCFG SLMIACLPTY ASIGTWAPAL
LLLARLIQGL SVGGEYGTTA TYMSEVALRG QRGFFASFQY VTLIGGQLLA VLVVVILQQL
LTEDELRAWG WRIPFVVGAI AALISLMLRR SLHETSSAEA RNDKDAGSIG GLFRNHAAAF
ITVLGYTAGG SLIFYTFTTY MQKYLVNTAG MTAKNASYVM TGALFLFMVV QPFFGMLSDR
IGRRNSMLLF GGLGTLCTVP LLMALKTVTS PIMAFVLISL ALCIVSFYTS ISGLVKAEMF
PPQVRALGVG LAYAVANAAF GGSAEYVALG LKTLGMENTF YWYVTAMMAI AFLFSLRLPK
QAAYLHHDD
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