| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1375 |
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| Symbol | pcaR |
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| ID | 1043894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1566317 |
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| End bp | 1567192 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637144776 |
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| Product | pca regulon regulatory protein |
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| Protein accession | NP_743534 |
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| Protein GI | 26988109 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.162445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG AAACCCTGGG CAACGATTCC GGCAATGCTG AGGTGGCGCG ACCTGCTTCG
GCTGCCATGG CGCCGCCGAT CGTGGCTTCC CCGGCCAAGC GCATCCAGGC CTTTACCGGT
GACCCGGACT TCATGACCTC ACTGGCACGT GGCCTGGCCG TGATCCAGGC ATTCCAGGAG
CGCAAGCGCC ACCTGACCAT CGCCCAGATC AGTCACCGTA CCGAAATCCC TCGCGCGGCG
GTGCGCCGTT GCCTGCACAC GTTGATCAAA CTGGGTTACG CCACCACCGA CGGGCGTACC
TATTCGCTGC TGCCCAAAGT GCTGACCTTG GGGCATGCCT ACCTGTCGTC GACGCCGCTG
GCAATTTCTG CACAGCCGTA CCTGGATCGC ATCAGCGACC AGCTGCATGA GGCGGCCAAC
ATGGCCACCC TCGAGGGCGA CGACATCCTT TATATAGCCC GTTCGGCCAC GGTCGAGCGG
CTGATCTCGG TCGATCTGTC GGTGGGCGGG CGCCTGCCGG CCTATTGCAC GTCGATGGGG
CGCATTCTGC TGGCGGCCAT GGATGACACC AGCCTGCGTG AGTACCTGGA ACGTGCCGAC
CTCAAAGCGC GCACCAGCCG CACCCTGAAT GACCCCGAAT CGTTGTTCGC CTGCATCCAG
CAGGTGCGCG CACAGGGCTG GTGTGTGGTA GACCAGGAAC TGGAACAGGG GCTGCGATCG
ATTGCCGTGC CGGTGTATGA CGCTTCGGGG CAGGTGTTGG CTGCGCTGAA CGTCAGTACC
CATGTCGGGC GGGTGACCCG CAGTGAACTG GAGCAGCGGT TCTTGCCGAT TTTGCTGGCA
GCCAGCCGGG ACCTTTGCCA CCAGTTGTTT GGTTGA
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| Protein sequence | MSDETLGNDS GNAEVARPAS AAMAPPIVAS PAKRIQAFTG DPDFMTSLAR GLAVIQAFQE
RKRHLTIAQI SHRTEIPRAA VRRCLHTLIK LGYATTDGRT YSLLPKVLTL GHAYLSSTPL
AISAQPYLDR ISDQLHEAAN MATLEGDDIL YIARSATVER LISVDLSVGG RLPAYCTSMG
RILLAAMDDT SLREYLERAD LKARTSRTLN DPESLFACIQ QVRAQGWCVV DQELEQGLRS
IAVPVYDASG QVLAALNVST HVGRVTRSEL EQRFLPILLA ASRDLCHQLF G
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