Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1352 |
Symbol | |
ID | 1041828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1541621 |
End bp | 1542106 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637144753 |
Product | putative nucleotide-binding protein |
Protein accession | NP_743511 |
Protein GI | 26988086 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.154119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.12708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCGT TCGACGTGGT ATCGGAACTG GACAAGCACG AAGTGCAGAA CGCGGTCGAC AACGCCATCA AGGAACTGGA CCGCCGCTAC GACCTCAAGG GCAAAGGCAC CTTCGAGTTC AAGGACAAAG AGCAGACCGT GATGCTCACC GCCGAGGAAG AGTTCCAGCT CGAGGCGATG CTGGAGATCC TGCGCCTGGC ATTGGTCAAG CGCAAGATCG ACGTGAAGTG CCTGGAAACC AAGGACCCCT ACGCCTCCGG CAAGGAAAAG AAACAGGAAG CCAAGTTCCG CGAAGGCATC GACAAGGACC TGGCCAAAAA GATCGTTGCC ACCATCAAGG ATGGCAAGCT GAAAGTACAG GCCGCCATCC AGGGTGAGCA GGTACGGGTA ACCGGCAAGA AACGTGACGA TCTGCAGGAA GCCATTGCCC TGCTGCGCAC CAAGGAATTC GACATGCCGC TGCAGTTCAA CAACTTCCGC GACTGA
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Protein sequence | MPSFDVVSEL DKHEVQNAVD NAIKELDRRY DLKGKGTFEF KDKEQTVMLT AEEEFQLEAM LEILRLALVK RKIDVKCLET KDPYASGKEK KQEAKFREGI DKDLAKKIVA TIKDGKLKVQ AAIQGEQVRV TGKKRDDLQE AIALLRTKEF DMPLQFNNFR D
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