Gene PP_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1344 
Symbol 
ID1041731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1531242 
End bp1531871 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content66% 
IMG OID637144745 
Producthypothetical protein 
Protein accessionNP_743503 
Protein GI26988078 
COG category[S] Function unknown 
COG ID[COG4701] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.444258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000672782 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAGCTA TCGAGAACCA GTCTTGTCTT TGGCTGCCTG TGCCGGCCTC TTCGCGGGTG 
AACCCGCTCC TACAAGATAC CGATAACCCT GGCAGGAGCG GGTTCCCCCG CGAAGAGGCC
GGCACAGGCA ACGGAGATGT TAGACTGTGC CCACGTCACT TCACGCGTAC CCCCATGGCC
TACAAACCCT CCCCCGCCCA GCCACCTTCC GCCCTGCTGC GCCAGGTGCG CCCGCTGCGC
CTGCTGCTGA ACCAGGCCGA GCGCCTGGAG CACTTGCAGC GCCTGCTGGA AAGCCAGTTG
CAACCGGCTG CCCGCGAGCA CTGCCATGTG GCGTCCTGGC GCGATGGTAC TTTGTTGCTG
GTGGTTACCG ACGGCCATTG GGCAACCCGC CTGCGCTACC AGCAGAAGCG CTTGTTGGCG
GCCCTGCAGG CCATGGAAGC ATTCGGCAAC CTCAGGCGCA TCCTGTACAA GGTACAGCCG
CCGCTGGTAC CGGCCAAGCG TGGCGGGCAT GCGGCCGAGC TTTCGAACAG CGCGGCCGAG
AGCCTGCGCG ACACCGCCGA GGGCATTACC GACCCCAAAC TGCGTGCCGC ACTGGAACGG
TTGGCGGCCC ACGCCCAGGG CAAGCCATAA
 
Protein sequence
MKAIENQSCL WLPVPASSRV NPLLQDTDNP GRSGFPREEA GTGNGDVRLC PRHFTRTPMA 
YKPSPAQPPS ALLRQVRPLR LLLNQAERLE HLQRLLESQL QPAAREHCHV ASWRDGTLLL
VVTDGHWATR LRYQQKRLLA ALQAMEAFGN LRRILYKVQP PLVPAKRGGH AAELSNSAAE
SLRDTAEGIT DPKLRAALER LAAHAQGKP