| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1333 |
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| Symbol | murF |
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| ID | 1043795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1518290 |
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| End bp | 1519657 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144734 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | NP_743492 |
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| Protein GI | 26988067 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAGC CGCTGTCACT CAGCCAGCTG ACCACAGCAC TGAAGGGTCA ACACATCGGT
GGCGACGCCA CGTTCACCGG CGTCAGCATC GATAGCCGCA GTGTCAGCGC CGGGCAACTT
TTCGTCGCCC TGGCCGGCCC GCGTTTCGAT GGCCATGACT ACCTGGCAGA TGTGAAAGCC
AAAGGCGCGG TAGCCGCCCT GGTCGAGCGT GAAGTAGCCG ATGTCGACCT GCCGCAGTTG
CAGGTGGCCG ATTGCCGCCT GGCCCTCGGC CAGCTCGGTG CATTGAACCG CGCCGCTTTC
GACAAGCCAG TGGTGGCCAT TACCGGTTCC AGCGGCAAGA CCACGGTCAA GGAAATGCTC
GCCAGCATCC TGCGCACCCG TGGCCTGGTG CACGCCACCC GTGGCAACTT GAACAATGAC
CTCGGTGCAC CCCTGACACT GCTGGAGATC GCCCCGGAAC ACAGCGCGGC AGTGATCGAG
CTGGGCGCCT CGCGCATTGG CGAAATCCGC TACACCGTAG GCCTGACGCA ACCGCAGGTG
GTCATTATCA ACAACGCCGG TACTGCCCAT GTTGGCGAAT TCGGCGGCCC GGACAAGATC
GTCGAAGCCA AGGGCGAGAT TCTCGAAGGC CTGGGCCAGG GCGGTATTGC CATCCTCAAC
CTGGACGACA AAGCCTTTGA CATCTGGAAG GCGCGTGCCG GTGCGCACAA GGTCGTCAGT
TTCGCACGCA GCAACCCGAA GGCCGATTTC CACGCGTCAG ACATTGGTCG CGATGCCCGT
GGCTGCCCGT CCTTCACCCT GCATGGCGCC GGTGAAACAG TAGCCGTGCA ACTCAATGTG
CTGGGTGAAC ACAACGTCAG CAACGCCCTG GCCGCCGCCG CCGCTGCACA TGCCGTTGGT
CTGAGCCTGA GCGGCATCGC CGCCGGCCTG GCTGCGGTGC AACCGGTCAA GGGGCGTACC
GTGGCGCAGA TCGCGCCGAA CGGGGTACGG GTAATCGACG ACAGTTACAA CGCAAATCCC
ACCTCTATGT GCGCAGCCAT TGATATACTC GCCGGCTTTT CCGGACGCAC CGTTCTGGTG
CTTGGGGATA TCGGCGAATT GGGGCAATGG GCGGAAGAAG GCCACCGTCA GGTGGGTGAC
TACGCGCGTG GCAAGGTCGA CGCCCTGTAC GCAGTGGGTT CCAACATGAC ACATGCGGTC
AAGGCGTTCG GCGCCAATGG CCGCCATTTC GCTACTCAAG CTGAGCTGAT CGATGCGGTT
AGCGCCGAGA ATGCCAGTGA CACCACTATC TTGATCAAGG GCTCGCGCAG CGCTGCGATG
GAAAACGTCG TGGCGGCATT GTGCGGTGCC AGCGGGGAGA AACATTAA
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| Protein sequence | MLKPLSLSQL TTALKGQHIG GDATFTGVSI DSRSVSAGQL FVALAGPRFD GHDYLADVKA
KGAVAALVER EVADVDLPQL QVADCRLALG QLGALNRAAF DKPVVAITGS SGKTTVKEML
ASILRTRGLV HATRGNLNND LGAPLTLLEI APEHSAAVIE LGASRIGEIR YTVGLTQPQV
VIINNAGTAH VGEFGGPDKI VEAKGEILEG LGQGGIAILN LDDKAFDIWK ARAGAHKVVS
FARSNPKADF HASDIGRDAR GCPSFTLHGA GETVAVQLNV LGEHNVSNAL AAAAAAHAVG
LSLSGIAAGL AAVQPVKGRT VAQIAPNGVR VIDDSYNANP TSMCAAIDIL AGFSGRTVLV
LGDIGELGQW AEEGHRQVGD YARGKVDALY AVGSNMTHAV KAFGANGRHF ATQAELIDAV
SAENASDTTI LIKGSRSAAM ENVVAALCGA SGEKH
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