Gene PP_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1321 
SymbolsspB 
ID1041601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1507596 
End bp1508057 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID637144723 
ProductClpXP protease specificity-enhancing factor 
Protein accessionNP_743481 
Protein GI26988056 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATGCG CAAGCTTTAA GGAGCCGTTG ATGAACTCCA GTCGCCCCTA TCTGGTTCGA 
GCACTGTACG AGTGGATCGT CGACAACGAT TGCACGCCCC ATATGCTGGT CAATGCCGAA
TTCCCGAAAG TTCAGGTGCC GGATGGTTTC GCCAGTGATG GCCAGATCGT CTTGAATATC
TCGCCAAGTG CCGTGCGTAG CCTGCACATG GACAATGATG CAGTCAGCTT CGAGGGCCGC
TTCAGTGGCG TGGCTCACTC GCTGTTCGTG CCGGTTGGTG CAATCCTGGG TATCTACGCC
CGCGAAAATG GCCAGGGTAT GGTCTTCGAG CTGGAGCCGT CTTCGATGGA TGGCGACGAG
CTGGAAGACG ATGATGTGCA GCCGGATGAC GATGGCCCGC CAGACGATGG AGGGCAGCCG
CCGCGTCCGA CTGGCCGGCC AAGCCTGAAA GTGGTCAAGT AA
 
Protein sequence
MKCASFKEPL MNSSRPYLVR ALYEWIVDND CTPHMLVNAE FPKVQVPDGF ASDGQIVLNI 
SPSAVRSLHM DNDAVSFEGR FSGVAHSLFV PVGAILGIYA RENGQGMVFE LEPSSMDGDE
LEDDDVQPDD DGPPDDGGQP PRPTGRPSLK VVK