Gene PP_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1315 
SymbolrplM 
ID1043891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1503194 
End bp1503622 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content54% 
IMG OID637144717 
Product50S ribosomal protein L13 
Protein accessionNP_743475 
Protein GI26988050 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.161959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTT TTACTGCTAA ACCGGAAACA GTAAAGCGCG AGTGGTTCGT AGTCGACGCC 
GCTGGCCAGA CCCTGGGTCG TCTGGCTACC GAAATCGCTA CCCGTCTGCG TGGCAAACAC
AAACCAGAAT ACACCCCTCA CGTTGACACC GGCGACTACA TCGTCGTTAT CAACGCCGAG
CAGGTTCGTG TGACTGGTGC CAAGTCTTCC GACAAAATGT ACTACTCCCA CTCCGGTTTC
CCAGGCGGTA TCAAGGAAAT CAACTTCGAG AAGTTGATCG CCAAGGCCCC TGAGCGTGTT
ATCGAAACTG CGGTCAAAGG CATGCTGCCT AAGAACCCGC TGGGTCGCGA CATGTACCGC
AAGCTGAAAG TGTACGCGGG TGCTGCTCAC CCACACACTG CTCAGCAGCC TCAAGAACTG
AAGATCTAA
 
Protein sequence
MKTFTAKPET VKREWFVVDA AGQTLGRLAT EIATRLRGKH KPEYTPHVDT GDYIVVINAE 
QVRVTGAKSS DKMYYSHSGF PGGIKEINFE KLIAKAPERV IETAVKGMLP KNPLGRDMYR
KLKVYAGAAH PHTAQQPQEL KI