Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1289 |
Symbol | |
ID | 1043300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1475019 |
End bp | 1475798 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637144691 |
Product | hypothetical protein |
Protein accession | NP_743449 |
Protein GI | 26988024 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.657969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGG TGATTTCCCC CGCCAAGACC CTCGACTACG ACACCCCGCC AGTGACCGAG CGTTTCACCC TGCCCCAGTA CCTGGATGAA TCCCAGGCCC TGATCCAGCA GCTGCGCGAA CTGTCGCCGG CGCAGATCAG CGAGCTGATG CACCTGTCCG ACAAGCTCGC CGGCCTGAAT GCTGCGCGCT TTGGCAGCTG GACCCCAGAC TTCACCCCGG CCAATGCCAA GCAGGCGCTG CTGGCGTTCA AGGGTGACGT GTACACCGGC CTCGATGCCG AGAGCCTGAG TGAAGACGAC TTCAGCTACG CTCAGGGCCA CCTGCGCATG CTCTCGGGCC TATATGGCCT GCTGCGCCCG CTCGACCTGA TGCAGCCCTA CCGCCTGGAG ATGGGCACCA AGCTGGCCAA CGCCCGCGGC AAGGACCTGT ACGCCTTCTG GGGCACGCGC ATCAGCGAAT GGCTGAATCA GGCCCTGGCC GACCAAGGCG ATGACGTGCT GTTGAACCTG GCCAGTAACG AGTATTTCAG TGCAGTGAAA CGCAGTGCAC TGAAGGCCCG GGTAATCAAC GTCGACTTCA AGGACCAGAA AAACGGTCAG TACAAGATCA TCAGCTTCTA CGCCAAGAAA GCCCGCGGCA TGATGAGCCG CTTCGTCATC CAGCAGCGCA TCAGCACCCC GGAACAGCTC AAGCAGTTCG ATGCTCAGGG GTACTACTAC AGTGCCGAGC AGTCCAAGCC AGACCATTTG GTGTTCCTGC GCGATCACCC CGCGGAGTGA
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Protein sequence | MLTVISPAKT LDYDTPPVTE RFTLPQYLDE SQALIQQLRE LSPAQISELM HLSDKLAGLN AARFGSWTPD FTPANAKQAL LAFKGDVYTG LDAESLSEDD FSYAQGHLRM LSGLYGLLRP LDLMQPYRLE MGTKLANARG KDLYAFWGTR ISEWLNQALA DQGDDVLLNL ASNEYFSAVK RSALKARVIN VDFKDQKNGQ YKIISFYAKK ARGMMSRFVI QQRISTPEQL KQFDAQGYYY SAEQSKPDHL VFLRDHPAE
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