Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1285 |
Symbol | algK |
ID | 1043198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1468686 |
End bp | 1470140 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637144687 |
Product | Sel1 domain protein repeat-containing protein |
Protein accession | NP_743445 |
Protein GI | 26988020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000475097 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCTGTG AGGGACGGAC AATGATCTCT GATACCTACA AGGTCCGCGT GAACCTGGGG TTGTGTGCAC TGGCCGCCGC CATCACCCTG GCCGGCTGTG CCGGCCTGCC CGACCAGCGC CTGGCCAACG AGGCCCTGAA GCGCGGTGAC ACGGCATTGG CCGAGCGCAA CTACAAGGCG CTGGCCGACC TGGGCTACAG CGAAGCGCAA GTCGGCCTGG CGGACATCAA GGTGGCCACC CGCGACCCCT CGCAAATCAA GGAAGCCGAG GCCACCTATC GCGCTGCGGC CGCCACGTCG CCACGCGCCC AAGCGCGCCT TGGCCGCCTG CTGGTGGCCA AGCCGGACAG CACCCAGGCC GAACGTGAGG AAGCCGAAAC CCTGCTCAAG CAGGCCGCGA AACAGGGCCA AAGCAATACC CTGATTCCGC TGGCAATGCT CTACCTCAGC TACCCGCAGA GTTTCCCCAA GGTCAACGCG CAGCAGCAGA TCGACCAGTG GCGCGCCGCC GGCAACCCGG AAGCGGGCCT GGCCCAGGTG CTGCTGTACC GCACCCAGGG CACCTATGAC CAGCACCTGG GTGAAGTGGA AAAGATCTGC AAGGCCGCGC TGAACACCAC CGACATCTGC TACGTCGAAC TGGCCACCGT GTACCAGAAA CGTGGCCAGG CCGATCAGCA AGCCGCCCTG CTCGGCCAGC TGAAATCCGC CTATGCCCGT GGCGCCGTAC CGGCCACCCG GGTTGACAGC GTGGCCCGGG TGCTGGCCGA TCGCAGCCTT GGCCAGACCG ACGAAAAAAC CGCCAAGGAG CTGCTCGAGC AAGTAGCCCC GGCCAACCCG GCGTCCTGGG TCAGCCTGGC ACAGCTGGTA TACGACTTCC CCGAACTGGG CGACACCGAC CAGTTGATGG CTTACATCGA CAAAGGCCGC GAAGCTGAAC AACCCCGCGC CGAACTGCTG CTGGGCCGTC TGTACTACGA AGGCAAAACC CTGCCAGCCG ACGCTCAAAA AGCCGAGCAG CACCTGCAAG CTGCTGCCGA AGCCGGTGAG ATCAGCGCCC ATTACTACCT GGGCCAGCTT TACCGCCGCG GCTACCTGGG CAATGTCGAG CCGCAGAAGG CCGTCGACCA CCTGCTGGCC GCCGCCCGTG GCGGGCAGAA CAGCGCCGAC TATGCCCTGG CCCAGCTGTT CAGCGAGGGC CACGGCATCC GCCCGCAACC GGGCAACGCC TGGGTGTTCG CCCAGCTGTC GCAGGCCAAC CCGACGCCGC AATCAGCCGA ACTGCTGCAG CAGCTCGACC AGCAACTGAC ACCTGATCAG CGCAACCAGG CCCAGCAACT GCTGGACCAG GAAAAGCGTG CACGCGGCAG CCTGGCGCAG GGCGCGAATA GCACCCTGGC CCTCGAAGCC CTGCAAGACG ACGAAAAAGA AGTAGACGGT GAGGACTCGC TATGA
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Protein sequence | MACEGRTMIS DTYKVRVNLG LCALAAAITL AGCAGLPDQR LANEALKRGD TALAERNYKA LADLGYSEAQ VGLADIKVAT RDPSQIKEAE ATYRAAAATS PRAQARLGRL LVAKPDSTQA EREEAETLLK QAAKQGQSNT LIPLAMLYLS YPQSFPKVNA QQQIDQWRAA GNPEAGLAQV LLYRTQGTYD QHLGEVEKIC KAALNTTDIC YVELATVYQK RGQADQQAAL LGQLKSAYAR GAVPATRVDS VARVLADRSL GQTDEKTAKE LLEQVAPANP ASWVSLAQLV YDFPELGDTD QLMAYIDKGR EAEQPRAELL LGRLYYEGKT LPADAQKAEQ HLQAAAEAGE ISAHYYLGQL YRRGYLGNVE PQKAVDHLLA AARGGQNSAD YALAQLFSEG HGIRPQPGNA WVFAQLSQAN PTPQSAELLQ QLDQQLTPDQ RNQAQQLLDQ EKRARGSLAQ GANSTLALEA LQDDEKEVDG EDSL
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