| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1282 |
|---|
| Symbol | algX |
|---|
| ID | 1042603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1464176 |
|---|
| End bp | 1465615 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637144684 |
|---|
| Product | alginate biosynthesis protein AlgX |
|---|
| Protein accession | NP_743442 |
|---|
| Protein GI | 26988017 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCAC ACCTGATGAA ACTGCTGGGC CTGTCCGCCG CCCTTCTGGC AATCAGCCAG
GGCGTGCGCG CCGAAGACGT CAAGGCCCCG ACCTTCAGCG CCGAGCCCTG CTGCCAGTTG
TGCCCTGAAG CGCACGATGC AAGCCGCTAC ACCACCCGCT ATCAGCAAAA CTTCACCACG
CTGGTGCAGG CCCAGGGCGA CTGGCTGTTC CGCACCCGCG AAGACCTGCG CACCGAGTTC
AACACCACCC CAGCCGGCTA CAAACGCCTG CAGCAAGTGC ACGACGCGTT CAAGAAACGT
GGCGTGGAAC TGGTGGTGGT GTACCAGCCG ACCCGCGGCC TGGTGAACCG CAACATGCTC
AACCCGGCGG AAAAAGCCGC GTTCGACTAC CAGAAGGCCC TGGGCAACTA CCAGGCCATG
CTCAAGCGCT TCGCCAGCAT GGGTTACAAC GTGCCCGACC TGTCACCGCT GACCAACGAG
CAACTGGCCG CCGCTGACCA GGGCAAGGAC TTCTACTTCC GTGGCGACCA GCACTGGACG
CCGTACGGTG CCGAGCGCGC GGCGAAGATC GTGGCCGACA CCGTGCACAA GATGCCGGCC
TTCGAAGGCA TCCCGCGCAA GGAATTCGAG ACCAGGAAGT CCGGGCGCAT GGGCAAGACC
GGCACCCTGC ACAACGTTGC CGGCCAACTG TGCGGCACCA GCTACGCCGT CCAGTACATG
GACCAGTTCG CCACCGAGCC GAAAGGCGCG AGCGGTGGCG ACGACCTGTT CGGTGACAGC
GGCAATGCGC AGATCACCCT GGTCGGTACC AGCCACAGCG GCAAGAACTA CAACTTCTCG
GGCTTCCTCG AGCAATACAT CGGCGCCGAC GTGCTCAACG TCGCCTTCCC AGGCGGTGGC
CTGGAAGGGT CGATGATCCA GTACCTGGGC AGCGAGGAAT TCCAGAAGAA CCCGCCGAAG
ATCCTGATCT GGGAATTCTC CCCGCTGTAC CGCCTGGACC AGGAAACCAT CTGGCGGCAA
ATCCTTGGCC TGCTCGACGA CGGCTGCGAC GACCGCCCAG CCCTGATGAG CGCCAGCACC
ACCCTCAAGC CTGGCAAGAA CGAGCTGATG GTCAACGGCA AGGGCGGCGT GATCAAAGAC
CTGATCAACC GCAACCTGCA GATGGACGTC AAGTTCGAAG ATCCCTCGGT GAAGGTGTTG
CAGGCCACCC TCTGGTACCT CAACGGCCGC CACGAGGACA TCAAGCTGGA AAAACCGGAA
ACCTCCGACA CCGACGGCCG CTTCGTCTTC CAGATGCGCG AAGACGAGGA CTGGGCCAGC
CAGCGCCTGC TCGCGTTCGA GGTACAGGGG CCGGAAAGCG GCACCCAGAA GGTCGAAGCC
AAGCTCTGCA AACGCAACAA CTTCGCCGTG CCTGCGCAGA CCGCGCAGGC AGGCCAGTGA
|
|---|
| Protein sequence | MTPHLMKLLG LSAALLAISQ GVRAEDVKAP TFSAEPCCQL CPEAHDASRY TTRYQQNFTT
LVQAQGDWLF RTREDLRTEF NTTPAGYKRL QQVHDAFKKR GVELVVVYQP TRGLVNRNML
NPAEKAAFDY QKALGNYQAM LKRFASMGYN VPDLSPLTNE QLAAADQGKD FYFRGDQHWT
PYGAERAAKI VADTVHKMPA FEGIPRKEFE TRKSGRMGKT GTLHNVAGQL CGTSYAVQYM
DQFATEPKGA SGGDDLFGDS GNAQITLVGT SHSGKNYNFS GFLEQYIGAD VLNVAFPGGG
LEGSMIQYLG SEEFQKNPPK ILIWEFSPLY RLDQETIWRQ ILGLLDDGCD DRPALMSAST
TLKPGKNELM VNGKGGVIKD LINRNLQMDV KFEDPSVKVL QATLWYLNGR HEDIKLEKPE
TSDTDGRFVF QMREDEDWAS QRLLAFEVQG PESGTQKVEA KLCKRNNFAV PAQTAQAGQ
|
|---|
| |