Gene PP_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1279 
SymbolalgJ 
ID1042496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1460296 
End bp1461462 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content63% 
IMG OID637144681 
Productalginate O-acetylation protein AlgJ 
Protein accessionNP_743439 
Protein GI26988014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.803653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATGACCA TGACCCGGAC ATTACGCATC ACCTACTCCC TGTCGTTCCT CGGCCTGCTG 
GTCGGCATGG GCGCCTGGTC CACCGGTGGC CTGCAGAGTT TCCAGCGCAC CGAGCAGATG
ACCCTGCTCA ACGGCAAGCT GGCCAAGGCC GCCGAGACCC ACTACGACGC CGAGTTCCCG
ATCAAGCGCC TGGGCACCAA CGTGTGGGCG GCCATGGACT TCAAGCTGTT CAACGAAGGC
CGCCCAGGTG TGGTACTGGG CCGCGACCAG TGGTTGTTCA GCGACGAAGA GTTCAAGCCC
ACCGCCGGTG CCGAGCAATT GATGCAGGAA AACCTGGCAC TGATCCGTGG CGTACGCGAC
ACCCTGCAGC AACACGGTAG CCAGCTGGTG CTGGCGATCG TGCCGGCCAA GGCACGGGTC
TACACCGAGT ACCTGGGCAA AGAGCGGCCT GCCAGCCTGC ATGACGACCT GTACAACCAG
TTCCATGCCC AGGCACGCCA GGCCAACGTG TTCGCACCGG ACCTGATGGC ACCGATGGAG
CAGGCCAAGG CCCGCGGCCA GGTATTCCTG CGTACCGATA CCCACTGGAC GCCTATGGGT
GCCGAAGTGG CGGCGCAGGC GCTGGCCGAA GCGGTCAGCC GCCAGAGCCT GCTCAACGGC
GACCCACAAG CCTTCATCAC CGAAGCCGGC AACACCGCCC CCTACAAGGG CGACCTGACC
AACTTCCTGC CACTGGACCC CTTGTTCAGC AACCTGCTGC CGGCCCCGGA CAACCTGCAG
AAACGCACCA CCCGGCCGGT CGATGCCGAG GGTGACGCCG GCGACGCGTT GTTCGCCGAC
AAGCAGATCC CGGTTGCACT GGTAGGCACC AGCTACAGCG CCAACCCGCA CTGGAACTTC
CTTGGCGCGC TGCAGCAGGC CCTGCGCAGC GACGTCGCCA ACTACGCCGA AGACGGCCAT
GGCCCGCTGC TGCCGATGCT CAAGTACCTG CAAAGCGATG CCTTCAAGAA CGCCGCACCA
CAAGTGGTGG TGTGGGAATT CCCCGAACGT TATCTGCCAA TGAAAAACGA CCTCAGCAGC
TTCGATCCGC AGTGGATCGC GCAGCTGAAA AACTCCCGTA AATCCGAAGA AAACCTGGCC
TTGTCGTCCA CCCGGACAGA CCACTGA
 
Protein sequence
MMTMTRTLRI TYSLSFLGLL VGMGAWSTGG LQSFQRTEQM TLLNGKLAKA AETHYDAEFP 
IKRLGTNVWA AMDFKLFNEG RPGVVLGRDQ WLFSDEEFKP TAGAEQLMQE NLALIRGVRD
TLQQHGSQLV LAIVPAKARV YTEYLGKERP ASLHDDLYNQ FHAQARQANV FAPDLMAPME
QAKARGQVFL RTDTHWTPMG AEVAAQALAE AVSRQSLLNG DPQAFITEAG NTAPYKGDLT
NFLPLDPLFS NLLPAPDNLQ KRTTRPVDAE GDAGDALFAD KQIPVALVGT SYSANPHWNF
LGALQQALRS DVANYAEDGH GPLLPMLKYL QSDAFKNAAP QVVVWEFPER YLPMKNDLSS
FDPQWIAQLK NSRKSEENLA LSSTRTDH