Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1279 |
Symbol | algJ |
ID | 1042496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1460296 |
End bp | 1461462 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144681 |
Product | alginate O-acetylation protein AlgJ |
Protein accession | NP_743439 |
Protein GI | 26988014 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.803653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATGACCA TGACCCGGAC ATTACGCATC ACCTACTCCC TGTCGTTCCT CGGCCTGCTG GTCGGCATGG GCGCCTGGTC CACCGGTGGC CTGCAGAGTT TCCAGCGCAC CGAGCAGATG ACCCTGCTCA ACGGCAAGCT GGCCAAGGCC GCCGAGACCC ACTACGACGC CGAGTTCCCG ATCAAGCGCC TGGGCACCAA CGTGTGGGCG GCCATGGACT TCAAGCTGTT CAACGAAGGC CGCCCAGGTG TGGTACTGGG CCGCGACCAG TGGTTGTTCA GCGACGAAGA GTTCAAGCCC ACCGCCGGTG CCGAGCAATT GATGCAGGAA AACCTGGCAC TGATCCGTGG CGTACGCGAC ACCCTGCAGC AACACGGTAG CCAGCTGGTG CTGGCGATCG TGCCGGCCAA GGCACGGGTC TACACCGAGT ACCTGGGCAA AGAGCGGCCT GCCAGCCTGC ATGACGACCT GTACAACCAG TTCCATGCCC AGGCACGCCA GGCCAACGTG TTCGCACCGG ACCTGATGGC ACCGATGGAG CAGGCCAAGG CCCGCGGCCA GGTATTCCTG CGTACCGATA CCCACTGGAC GCCTATGGGT GCCGAAGTGG CGGCGCAGGC GCTGGCCGAA GCGGTCAGCC GCCAGAGCCT GCTCAACGGC GACCCACAAG CCTTCATCAC CGAAGCCGGC AACACCGCCC CCTACAAGGG CGACCTGACC AACTTCCTGC CACTGGACCC CTTGTTCAGC AACCTGCTGC CGGCCCCGGA CAACCTGCAG AAACGCACCA CCCGGCCGGT CGATGCCGAG GGTGACGCCG GCGACGCGTT GTTCGCCGAC AAGCAGATCC CGGTTGCACT GGTAGGCACC AGCTACAGCG CCAACCCGCA CTGGAACTTC CTTGGCGCGC TGCAGCAGGC CCTGCGCAGC GACGTCGCCA ACTACGCCGA AGACGGCCAT GGCCCGCTGC TGCCGATGCT CAAGTACCTG CAAAGCGATG CCTTCAAGAA CGCCGCACCA CAAGTGGTGG TGTGGGAATT CCCCGAACGT TATCTGCCAA TGAAAAACGA CCTCAGCAGC TTCGATCCGC AGTGGATCGC GCAGCTGAAA AACTCCCGTA AATCCGAAGA AAACCTGGCC TTGTCGTCCA CCCGGACAGA CCACTGA
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Protein sequence | MMTMTRTLRI TYSLSFLGLL VGMGAWSTGG LQSFQRTEQM TLLNGKLAKA AETHYDAEFP IKRLGTNVWA AMDFKLFNEG RPGVVLGRDQ WLFSDEEFKP TAGAEQLMQE NLALIRGVRD TLQQHGSQLV LAIVPAKARV YTEYLGKERP ASLHDDLYNQ FHAQARQANV FAPDLMAPME QAKARGQVFL RTDTHWTPMG AEVAAQALAE AVSRQSLLNG DPQAFITEAG NTAPYKGDLT NFLPLDPLFS NLLPAPDNLQ KRTTRPVDAE GDAGDALFAD KQIPVALVGT SYSANPHWNF LGALQQALRS DVANYAEDGH GPLLPMLKYL QSDAFKNAAP QVVVWEFPER YLPMKNDLSS FDPQWIAQLK NSRKSEENLA LSSTRTDH
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