Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1274 |
Symbol | |
ID | 1042248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1456168 |
End bp | 1456980 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637144676 |
Product | short chain dehydrogenase |
Protein accession | NP_743434 |
Protein GI | 26988009 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.145274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCG TCCTGATCAC CGGTTGTTCC AGCGGCATCG GCCGCGCCCT GGCCGACGCC TTCCGCGATG CGGGCCACCA TGTCTGGGCC ACCGCCCGCA AGCCTGAGGA TGTCGAGAAA CTGAGTGCCG CCGGCTACAC GGCTCGGCAG CTGGATGTAA ACGATGGCGA GGCGCTGGCC CGCCTGGCAG AGGAACTTGA TACCCTCGAT ATCCTGATCA ACAACGCCGG CTACGGCGCC ATGGGCCCAC TGCTCGATGG TGGCGTCGAC GCCCTGCGCC AGCAATTCGA AACCAACGTC TTCGCCGTGG TCGGCGTTAC CCGGGCGCTG TTCCCGCTGC TACGCCGCTC ACGCGGCCTG GTGGTGAATA TCGGCAGTGT ATCGGGCGTA CTGGTCACGC CATTCGCTGG CGCGTACTGC GCCTCGAAGG CGGCTGTGCA TGCCCTGAGC GATGCCTTGC GCCTGGAACT GGCGCCGTTC GGTGTACGGG TAATGGAAGT ACAGCCGGGC GCAATCGCCT CGCAGTTCGC CAGCAATGCC CAGCGCCAGG CCGAGCAGGT GCTGGCGGCA GACTCGGCGT GGTGGCCTTT GCGTGAGCAT GTGCAGGCGC GGGCGCGGGC ATCGCAGGAC AAGCCAACGT CGGCGGCGGT ATTTGCCCAA GGCGTGCTGG CAGCCGTCGG CAAGTCGCCG GCGCCCGCGG TGGTACGTTT GGGGAATGGC AGTACAGCCT TGCCGCTGAT GGCACGGTTG CTGCCGCGGC GGTTGCTGGA CTGGGTGCTG CGCAAGCGCT TTGGCCTGCT GCGCCCGCTC TGA
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Protein sequence | MPTVLITGCS SGIGRALADA FRDAGHHVWA TARKPEDVEK LSAAGYTARQ LDVNDGEALA RLAEELDTLD ILINNAGYGA MGPLLDGGVD ALRQQFETNV FAVVGVTRAL FPLLRRSRGL VVNIGSVSGV LVTPFAGAYC ASKAAVHALS DALRLELAPF GVRVMEVQPG AIASQFASNA QRQAEQVLAA DSAWWPLREH VQARARASQD KPTSAAVFAQ GVLAAVGKSP APAVVRLGNG STALPLMARL LPRRLLDWVL RKRFGLLRPL
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