| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1272 |
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| Symbol | |
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| ID | 1042500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1453365 |
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| End bp | 1454468 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637144674 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | NP_743432 |
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| Protein GI | 26988007 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.529481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGTGGC TTGAACCCTG GATGATTTCG AGAACCATTG AAATGACCAA CAACCGCAAA
ACCCTTTTCA TCGGCTCGGT GCTGGCCGTG GCCGTCCTGG CCGGCATCGT CGGCCCCTGG
ATGTTTGGCA GCGATCACCG CCAGAGCACC AATGACGCCT ATGTGACCGC CGACTACACC
GTGGTCGCGC CCAAAGTCGC CGGTTTCATC AAGCAAGTGC TGGTGGAAGA CAATCAGCAG
GTCACAGCTG GCCAGTTGCT GGCGACCATC GACGCGCGTG ACTACCAGGC CGCGCTGGAT
GCTGCGCAGG CGCAGTTGCT GGTAGCCCAG GCACAAAGCG CCGATGCCCG CGCCACGCTT
GAACGCCAGG ACGCGCTGAT TGCCCAGGCC GAAGCGGCAG TGAAGGCGGC CCAGGCTGAG
GTGGCGTTCG CCGACCATGA AGTCAACCGC TACAGCCGCC TTGCCGAGCA GGGCGCGGGT
ACCGTGCAGA ACGCCCAGCA GGCGCGCAGC GCTGTCGATC AAGCCCGTGC TCGCCTGGCC
AACGCTCAAG CTGCGCGGGT GGCGGCGCGC AAGCAGGTGG ACATCCTCAC GGCTCAAGTG
GCCAGCGCCG ATGGCCAGCT CAAGCGTGCC GAAGCAGGCC TGGAAAAGGC CCAGCTCGAT
CTGTCCTACA CCCGCATCAC AGCGCCGGTG GACGGTATGG TCGGCGAACG CGCCCTGCGC
GTGGGGGCCT ACGTCAACCC GGGCGCTCGC CTGCTGTCGG TGGTGCCGTT GCAGCAGGCC
TATGTGGTCG GCAACTTCCA GGAAACCCAG CTGACCCACG TACAGCCGGG CCAGCCGGTG
CGCATCAGCG TCGACACCTT CTCCGGCGAA ACCCTGCAAG GCCATGTGCA AAGCATTGCC
CCGGCTACCG GCGTCACCTT CGCCGCAGTC AAGCCAGACA ACGCCACCGG CAACTTCACC
AAGGTGGTGC AGCGCATTCC GGTCAAGATC GTTCTCGATG ATGGCCAGCC ACTGCTCACC
CGCCTGCGTG TGGGCATGTC GGTCGAAGCC ACCATCGACA CGCGTGGCGA CAAGCTGGAC
GGCAAAGAGG TAAGCGCGCG ATGA
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| Protein sequence | MRWLEPWMIS RTIEMTNNRK TLFIGSVLAV AVLAGIVGPW MFGSDHRQST NDAYVTADYT
VVAPKVAGFI KQVLVEDNQQ VTAGQLLATI DARDYQAALD AAQAQLLVAQ AQSADARATL
ERQDALIAQA EAAVKAAQAE VAFADHEVNR YSRLAEQGAG TVQNAQQARS AVDQARARLA
NAQAARVAAR KQVDILTAQV ASADGQLKRA EAGLEKAQLD LSYTRITAPV DGMVGERALR
VGAYVNPGAR LLSVVPLQQA YVVGNFQETQ LTHVQPGQPV RISVDTFSGE TLQGHVQSIA
PATGVTFAAV KPDNATGNFT KVVQRIPVKI VLDDGQPLLT RLRVGMSVEA TIDTRGDKLD
GKEVSAR
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