Gene PP_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1264 
Symbol 
ID1042509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1445901 
End bp1448078 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content65% 
IMG OID637144666 
Productfusaric acid resistance protein region 
Protein accessionNP_743424 
Protein GI26987999 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTT CCAGTTTGCC CGTGCGCTGG CTGCAAAGCC TGGAATGGCG CCGGGGCTTC 
TTTGCCTGGG CACGCACCGA CGGCGTGACC TGGGTGTACA TCTTCAAGGT GCTGGCCGCC
GCGTTCATTA CCTTGTGGTT GGCCATGCGC CTGGAGCTGC CGCAACCGCG TACAGCGATG
ATCACTGTTT TCATCGTCAT GCAGCCGCAA AGCGGGCATG TGTTCGCGAA AAGCTTCTAC
CGGGTGCTAG GCACCCTGGC GGGTTCGGCG ATGATGGTGG CGCTGATCGC CATCTTCCCG
CAGAACACCG AGCTGTTTCT GCCCAGCCTG GCGCTGTGGG TGGGCCTGTG CTCGGCCGGT
GCCATGCGCT ACCGCACCTT CCGCGCCTAT GGTTTCGTGC TGGCTGGCTA CACCGCAGCG
ATGATCGGCC TGCCGGTGCT GCAACACCCC GACCAGGCGT TCATGGCAGC GGTATGGCGG
GCGCTGGAAA TCGCCCTGGG TATTCTGGTG TCGACCTTCG TCAGTGCCGC GATCCTGCCG
CAGTCGGCCA GTGCCGCAAT GCGCAACGCC CTGTACCAGC GCTTTGGCGT GTTTGCCGGG
GTGGTGGTCG AGGCCCTGCG TGGCGACAGT CAAAAGGACC GCTTCGAGAG CAGCAACGTG
CGCTTCGTGG CAGAGGCAGT GGGCCTCGAG AGCCTGCGCA ACGTCACCGC TTTCGAAGAC
CCGCATATGC GCCGTCGCAG TGGCCGGCTG GTGCGCATGA ACAGCGAGTT CATGGCCATC
ACCACCCGCT TCAATGCCTT GCACCGCTTG CTGGAGCGCC TGCGTGCCCG TGGCCCGCTG
CAAATTGTCA GCGCTATCGA ACCGGGCCTG AATACCCTGG TGGAGTTGCT GCAGCCCTAT
GTGGGCCGGG CGTTGACTGA CGCCGATGCG CTGCGCCTGA CCCTGGAGCT GGCCGCCTAC
AAGGAAGGCC TGCAGGCCCA GGTGCGGGGG CTGCGGGCGG AGTACCTGGC AACGGACCCC
AGCGAATCCG ACCTGCTCGA TTTCCATACC GCGTTCGAGC TGCTGTACCG CTTCGTCGAC
GAGATGTTGA GCTACGCCGA AACCCATGCC TCGCTGGCCG CGCACAAGCA TGAGCGCGAG
CAGTGGGACG AACCCTACGT GGCGCAGACC AGCTGGCTGG TATCGCTGGC GGCCGGTGTG
CGCGCTTCGG CAGTGCTGTT GCTGCTGGGC AGCTACTGGC TGCTCAGCGA TTGGCCCAGC
GGCGCCATGA TGACCCTGAT CGCCACGGTC ACCGTATGCC TTTCTGCAGC GTCACCCAAC
CCCAAGCGCA TGTCGTTCCA GATGGCTTGC GGCACGGCCA TCGGCGCTTT TGTCGGCTTC
TTCGAAACCT TCTTCGTGTT CCCCTGGATC GACGGTTTCC CGCTGCTGTG CATGGTGCTG
GCGCCCGTGT TCGTGCTGGG CGCTTTTCTT TCGTCGCGCC CTGCCTACGC CGGTTATGGC
ATTGGCCTGC TGGTGTTCTT CGCGATTGGT TCGGTGCCGA ACAACCTCAC CGTTTATGAC
CCGTACACCT TCATCAACGA CTACATCGGC ATGGTGATCG GCATGTTCGT CTGTGCCGCC
GCCGGGGCGA TCATCCTGCC GCCCAACAGC CGCTGGTTGT GGAGCCGCCT GGAGCAGGCG
TTGCGCGAGC AGGTGCTGTT CGCCATCAGC GGCCGCCTGC GCGGCCTGGG CTCGGCCTTC
GAAAGCCGCA CCCGCGACCT GCTGCACCAG GCCTATGGCC TGGCGGCCGG CAAGCCGCAG
GTGCAGAGCC AGCTGATGGG CTGGATGTTC ACCGTGCTGG AGATCGGCCA CGCCGTCATC
GAGCTGCGCA AGGAGCAAGC CCGCGCCCCG GTGCACCCGG CCTATGCCGA GTCGCAGCCG
TGGCGCCAGG CAATCCGTGT CATGGGCCGT GCGCTGACCC GGCTGTTCCT GCAGCCCAGC
GCCAGCAACC ACGAGCGCGC ACTGGTGGCC GTGGACCACG CCATCGCCCG CGTGCAGGCC
ACCGACGAGC CATTCGCCCG GCACTTCGAC ACCTCGGTGC TGCGCCGCGT GCAAAGCTAC
CTGCACTTCA TCCGTACTTC CCTGCTGGAC CCACAGTCGC CACTGGCACC GGCGAAAGGA
TTGCACCATG CCCCGTGA
 
Protein sequence
MSTSSLPVRW LQSLEWRRGF FAWARTDGVT WVYIFKVLAA AFITLWLAMR LELPQPRTAM 
ITVFIVMQPQ SGHVFAKSFY RVLGTLAGSA MMVALIAIFP QNTELFLPSL ALWVGLCSAG
AMRYRTFRAY GFVLAGYTAA MIGLPVLQHP DQAFMAAVWR ALEIALGILV STFVSAAILP
QSASAAMRNA LYQRFGVFAG VVVEALRGDS QKDRFESSNV RFVAEAVGLE SLRNVTAFED
PHMRRRSGRL VRMNSEFMAI TTRFNALHRL LERLRARGPL QIVSAIEPGL NTLVELLQPY
VGRALTDADA LRLTLELAAY KEGLQAQVRG LRAEYLATDP SESDLLDFHT AFELLYRFVD
EMLSYAETHA SLAAHKHERE QWDEPYVAQT SWLVSLAAGV RASAVLLLLG SYWLLSDWPS
GAMMTLIATV TVCLSAASPN PKRMSFQMAC GTAIGAFVGF FETFFVFPWI DGFPLLCMVL
APVFVLGAFL SSRPAYAGYG IGLLVFFAIG SVPNNLTVYD PYTFINDYIG MVIGMFVCAA
AGAIILPPNS RWLWSRLEQA LREQVLFAIS GRLRGLGSAF ESRTRDLLHQ AYGLAAGKPQ
VQSQLMGWMF TVLEIGHAVI ELRKEQARAP VHPAYAESQP WRQAIRVMGR ALTRLFLQPS
ASNHERALVA VDHAIARVQA TDEPFARHFD TSVLRRVQSY LHFIRTSLLD PQSPLAPAKG
LHHAP