| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1261 |
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| Symbol | |
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| ID | 1042480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1442086 |
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| End bp | 1443060 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637144663 |
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| Product | 2-hydroxyacid dehydrogenase |
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| Protein accession | NP_743421 |
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| Protein GI | 26987996 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.829817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.657549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA CCGTCCTGGC CTTCAGCCGT ATCACCCCGG CCATGGCCGA ACGCCTGCAG
CAAGACTTCA ACGTGATCCT GCCCAACCCC AAGCTCGGCG ACATCAGCGC CCAGTTCAAC
GAAGCCCTGC CTGAAGCCCA TGGTCTGATC GGCGTTGGTC GCAAGCTCGG CCGGGCGCAG
CTTGAAGGCG CGGCCAGGCT GGAGGTGGTG TCCAGCGTGT CGGTCGGCTA TGACAACTAC
GACCTCGACT ACTTCAACGA GCGCGGCATC GCCCTGACCA ACACCCCCGA CGTGCTGACC
GAAAGCACCG CCGACCTGGG CTTCTCGCTG ATCATGGGCT GCGCCCGGCG CACCGCCGAG
CTGGATGCCT GGACCAAGGC CGGCAACTGG CAGGCCACCG TGGGCCCGGC CCACTTCGGC
AGCGATGTGC ATGGCAAGAC CCTGGGCATC GTCGGCATGG GCAACATTGG TGCAGCAGTG
GCACGCCGTG GCCGTTTCGG CTTCAACATG CCGATCCTGT ACAGCGGCAA CAGCCGCAAG
ACCGCGCTGG AGAAGGAGCT GGGCGCGCAG TTCCGCAGCC TGGATCAGTT GCTGGCCGAA
GCCGACTTCG TGGTCATCGT GGTGCCGTTG TCCGATGCCA CCCGCAAGCT GATCAGCAGC
CGCGAGCTGA AGCTGATGAA GCCGAGTGCG TTCCTGATCA ACATTGCCCG TGGGCCGGTG
GTGGATGAGG CGGCGCTGAT CGAGGCGCTG CAGGCGGGCA CCATTCGCGG CACAGGCCTG
GATGTGTACG AGAAAGAACC GCTGAGCGAC TCGCCGCTGT TCAAGCTGCC CAATGCGCTG
ACCTTGCCGC ACATTGGCTC GGCCACTGCC GAAACCCGTG AGGCCATGGC CAACCGGGCG
ATCGACAACC TGCGTGCGGC GCTGCTGGGC GAGCGGCCGC GGGACCTGGT GAACCCGCAG
GTGTGGAAGG GCTGA
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| Protein sequence | MKKTVLAFSR ITPAMAERLQ QDFNVILPNP KLGDISAQFN EALPEAHGLI GVGRKLGRAQ
LEGAARLEVV SSVSVGYDNY DLDYFNERGI ALTNTPDVLT ESTADLGFSL IMGCARRTAE
LDAWTKAGNW QATVGPAHFG SDVHGKTLGI VGMGNIGAAV ARRGRFGFNM PILYSGNSRK
TALEKELGAQ FRSLDQLLAE ADFVVIVVPL SDATRKLISS RELKLMKPSA FLINIARGPV
VDEAALIEAL QAGTIRGTGL DVYEKEPLSD SPLFKLPNAL TLPHIGSATA ETREAMANRA
IDNLRAALLG ERPRDLVNPQ VWKG
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