| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1259 |
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| Symbol | |
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| ID | 1045792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1438054 |
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| End bp | 1439667 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144661 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | NP_743419 |
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| Protein GI | 26987994 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.507972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGCA AATTCAAAAA ACAGTTATCA CTGCTGGACC TCACCTTCAT CGGCCTAGGC
GCCATCTTCG GCTCCGGCTG GCTGTTTGCC GCCAGCCACG TCTCGGCCAT CGCCGGCCCG
GCCGGCATCC TCTCCTGGTT CCTTGGCGGG TTCGCCGTAC TGCTGCTGGG CATCGTCTAC
TGCGAGCTGG GCGCCGCCTT GCCCCGCGCC GGTGGCGTGG TGCGCTACCC GGTGTACTCG
CACGGTCCAC TGTTGGGCTA CCTGATGGGC TTCATCACCC TGATCGCCTT TTCCAGCCTG
ATCGCCATCG AAGTGGTCGC CTCACGCCAA TACGCCGCCG CCTGGTTCCC TGGGCTGACC
AAGGCCGGCT CCAGCGACCC AACCGTGCTC GGCTGGCTGG TGCAGTTCGC CCTGCTGGGG
CTGTTCTTCT TCCTCAACTA CCGCAGCGTG AAAACCTTCG CCAAGGCCAA CAACCTGGTC
AGCGTGTTCA AGTTCATCGT GCCGCTGCTG GTGATCGGCG TACTGTTCAC CTTCTTCAAA
CCGGAAAACT TCGAGGTCCA GGGCTTTGCC CCGTTCGGCC TGTCCGGGGT GGAAATGGCC
GTATCCGCCG GCGGCATCAT CTTCGCCTAC CTGGGCCTGA CGCCGATCAT TTCGGTGGCC
AGCGAGGTCA AGAACCCGCA GCGCACCATC CCGATTGCGC TGATTCTTTC GGTGTTGCTG
TCCACCGCGA TCTACGCCTT GCTGCAACTG GCCTTCCTTG GCAGCGTGCC GACCGAAATG
TTGGCCAACG GCTGGGCCAG CGTGACCAAG GAACTGGCCC TGCCCTACCG TGACATCGCC
CTGGCGCTGG GTGTGGGCTG GCTGGCCTAC CTGGTGGTGG CCGACGCAGT GATCTCGCCA
AGCGGCTGCG GCAACATCTA CATGAACGCC ACCCCGCGCG TGATCTATGG CTGGGCGCAG
ACCGGCACCT TCTTCAAGTA CTTCACCCGC ATCGATGCAG AGTCCGGCAT CCCGCGCCCG
GCCCTTTGGC TGACGTTTGG CCTGTCGGTG TTCTGGACCC TGCCGTTCCC GTCGTGGGAA
GCGCTGATCA ACGTGGTATC CGCCGCTCTG GTACTGAGCT ACGCCGTGGC CCCGGTCAGC
GTTGCCGCCC TGCGCCGCAA TGCACCACAC ATGCCGCGCC CGTTCCGGGT CAAGGGCATG
ACTGTGCTCG GCCCGCTGTC GTTCATCATC GCTGCGCTGA TCGTGTACTG GTCGGGCTGG
AACACCGTGT CGTGGCTGCT GGCCCTGCAG ATCGTGATGT TCGTGCTGTA CCTGCTGTGC
AGCCGTTTCG TACCCACCCA GCACCTGTCG CTGGGTCAGC AAGTTCGCTC GTCGGCCTGG
CTGATCGGCT TCTACGCGCT GACCATCCTG CTGTCGTGGC TGGGCAGCTT CGGCGGCCTG
GGCGTCATCG GCCACCCATT CGACACCGTG GTCGTGGCGG CCTGTGCACT GGGCATCTAC
TACTGGGGCG CCGCCACGGG TGTGCCTGCC CACCTGGTGC GCCTGGAAGG CGACGACGAA
AGCGAAGCCT GCGCTGAAAC CTCTAACGGC CGCCCTGTTG CCGTCGCTTC CTGA
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| Protein sequence | MSGKFKKQLS LLDLTFIGLG AIFGSGWLFA ASHVSAIAGP AGILSWFLGG FAVLLLGIVY
CELGAALPRA GGVVRYPVYS HGPLLGYLMG FITLIAFSSL IAIEVVASRQ YAAAWFPGLT
KAGSSDPTVL GWLVQFALLG LFFFLNYRSV KTFAKANNLV SVFKFIVPLL VIGVLFTFFK
PENFEVQGFA PFGLSGVEMA VSAGGIIFAY LGLTPIISVA SEVKNPQRTI PIALILSVLL
STAIYALLQL AFLGSVPTEM LANGWASVTK ELALPYRDIA LALGVGWLAY LVVADAVISP
SGCGNIYMNA TPRVIYGWAQ TGTFFKYFTR IDAESGIPRP ALWLTFGLSV FWTLPFPSWE
ALINVVSAAL VLSYAVAPVS VAALRRNAPH MPRPFRVKGM TVLGPLSFII AALIVYWSGW
NTVSWLLALQ IVMFVLYLLC SRFVPTQHLS LGQQVRSSAW LIGFYALTIL LSWLGSFGGL
GVIGHPFDTV VVAACALGIY YWGAATGVPA HLVRLEGDDE SEACAETSNG RPVAVAS
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