Gene PP_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1253 
Symbol 
ID1042452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1431534 
End bp1431869 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content60% 
IMG OID637144655 
ProductArsR family transcriptional regulator 
Protein accessionNP_743413 
Protein GI26987988 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.138533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.278406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA ATGAAACCCC CGTTATCATG TCAACCATGC GAGCCTATAA ACATCCCAAC 
CCCGACGACC TCATTCTTGA ACGCCTGCTC TATGCGCTCA GCGACCCCGT GCGCCTGGAA
ATCGTCCGCC ACCTGGCCGG CGTGGCCGAG GCCAGCTGTG GCGAGCTGGA TGGAGGTCGG
CCGAAGTCGA GCATGTCCCA CCACTTCCGT GTGTTGCGTG ATGCAGGGCT GGTGCAAACC
CGCAATGTGG GGACTACCCA TATGAATTCG CTGCGTAGCG AGATGCTGGG CGAGCGGTTT
CCCGGGCTGC TGGAGTGCAT CCTGCGCCAG CAGTGA
 
Protein sequence
MAINETPVIM STMRAYKHPN PDDLILERLL YALSDPVRLE IVRHLAGVAE ASCGELDGGR 
PKSSMSHHFR VLRDAGLVQT RNVGTTHMNS LRSEMLGERF PGLLECILRQ Q