Gene PP_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1235 
Symbol 
ID1042439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1413421 
End bp1413894 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content62% 
IMG OID637144636 
Productalkyl hydroperoxide reductase/thiol specific antioxidant/ Mal allergen 
Protein accessionNP_743395 
Protein GI26987970 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.888046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTAG CACTCGACCA ACCTGTCGCC GACTTCCAGG CCCAGGCCAC CAGCGGGCAA 
ACCGTCAGCC TTGCCGAACT CAAGGGCCAG CAGGTGGTGG TGTACTTCTA CCCCAAGGAC
AGCACCCCAG GCTGCACCAC CGAGGGCCAG GGCTTCCGCG ACCAGCACGA CGCCTTCGCC
GCGGCCAACA CCGTGATATT CGGTGTGTCG CGTGATGGCA TCAAGTCGCA CGAGAACTTC
AAGGCCAAGC AAGGCTTCCC GTTCGAGCTG ATCAGCGACA AGGACGAGGC CCTGTGCCAG
CTGTTCGACG TGATCAAGCT GAAGAAGCTG TATGGCAAGG AGTACATGGG CGTTGACCGC
AGCACCTTCC TGATCGACAA GGACGGGGTG CTGCGCCAGG AATGGCGTGG CGTGAAAGTG
CCCGGGCATG TGGATGCCGT ATTGGCGGCC GCCCAAGCCT TGAACAAGGC TTGA
 
Protein sequence
MAVALDQPVA DFQAQATSGQ TVSLAELKGQ QVVVYFYPKD STPGCTTEGQ GFRDQHDAFA 
AANTVIFGVS RDGIKSHENF KAKQGFPFEL ISDKDEALCQ LFDVIKLKKL YGKEYMGVDR
STFLIDKDGV LRQEWRGVKV PGHVDAVLAA AQALNKA